PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 4F2M

#CDRs = 8; #Clusters = 9.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Mus.musculus	Mo_IGHV1-82*01	93.2	Mo_IGHV1-82*01	100.0	H1	13	H1-13-1	12	KASGYAFSSSWMN	BBBLBBAAABBBB
A	heavy	Mus.musculus	Mo_IGHV1-82*01	93.2	Mo_IGHV1-82*01	90.0	H2	10	H2-10-1	21	RIYPGDGETN	BBBAAALBBB
A	heavy	Mus.musculus	Mo_IGHV1-82*01	93.2	Mo_IGHV1-82*01	100.0	H3	15	H3-15-*	-1	ARGGYRYdPYYAMDY
A	heavy	Mus.musculus	Mo_IGHV1-82*01	93.2	Mo_IGHV1-82*01	100.0	H4	8	H4-8-1	21	ADKSSSTA	BBAAALBB
B	kappa	Mus.musculus	Mo_IGKV5-48*01	94.2	Mo_IGKV5-48*01	100.0	L1	11	L1-11-1	10	RASQSIGTSIH	BBABBAEABBB
B	kappa	Mus.musculus	Mo_IGKV5-48*01	94.2	Mo_IGKV5-48*01	100.0	L2	8	L2-8-*	-1	KYASESIS	BLLLBBBB
B	kappa	Mus.musculus	Mo_IGKV5-48*01	94.2	Mo_IGKV5-48*01	71.4	L3	9	L3-9-cis7-1	16	QQTDSWPTT	BBAABBbBB
B	kappa	Mus.musculus	Mo_IGKV5-48*01	94.2	Mo_IGKV5-48*01	100.0	L4	6	L4-6-1	16	GSGTDF	EBEABB
C	heavy	Mus.musculus	Mo_IGHV1-82*01	93.2	Mo_IGHV1-82*01	100.0	H1	13	H1-13-1	16	KASGYAFSSSWMN	BBBLBBAAABBBB
C	heavy	Mus.musculus	Mo_IGHV1-82*01	93.2	Mo_IGHV1-82*01	90.0	H2	10	H2-10-1	19	RIYPGDGETN	BBBAAALBBB
C	heavy	Mus.musculus	Mo_IGHV1-82*01	93.2	Mo_IGHV1-82*01	100.0	H3	15	H3-15-*	-1	ARGGYRYdPYYAMDY
C	heavy	Mus.musculus	Mo_IGHV1-82*01	93.2	Mo_IGHV1-82*01	100.0	H4	8	H4-8-1	13	ADKSSSTA	BBAAALBB
D	kappa	Mus.musculus	Mo_IGKV5-48*01	94.2	Mo_IGKV5-48*01	100.0	L1	11	L1-11-1	10	RASQSIGTSIH	BBABBAEABBB
D	kappa	Mus.musculus	Mo_IGKV5-48*01	94.2	Mo_IGKV5-48*01	100.0	L2	8	L2-8-1	21	KYASESIS	BLLABBBB
D	kappa	Mus.musculus	Mo_IGKV5-48*01	94.2	Mo_IGKV5-48*01	71.4	L3	9	L3-9-cis7-1	16	QQTDSWPTT	BBAABBbBB
D	kappa	Mus.musculus	Mo_IGKV5-48*01	94.2	Mo_IGKV5-48*01	100.0	L4	6	L4-6-1	14	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022