PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 4F15

#CDRs = 8; #Clusters = 10.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
B	heavy	Mus.musculus	Mo_IGHV5S21*01	71.4	Mo_IGHV5S21*01	76.9	H1	13	H1-13-*	-1	AASGFTGSDYDMS	BBBLELAAABBBB
B	heavy	Mus.musculus	Mo_IGHV5S21*01	71.4	Mo_IGHV5S21*01	30.0	H2	10	H2-10-*	-1	GILGGSERSY	EBBBBLLBBB
B	heavy	Mus.musculus	Mo_IGHV5S21*01	71.4	Mo_IGHV5S21*01	66.7	H3	15	H3-15-*	-1	ARHSWGayvqygmdG
B	heavy	Mus.musculus	Mo_IGHV5S21*01	71.4	Mo_IGHV5S21*01	75.0	H4	8	H4-8-1	22	RDNSRKTL	BBAAALBB
C	kappa	Mus.musculus	Mo_IGKV3-2*01	84.1	Mo_IGKV3-2*01	80.0	L1	15	L1-15-*	-1	RASESVSnyginfIN
C	kappa	Mus.musculus	Mo_IGKV3-2*01	84.1	Mo_IGKV3-2*01	62.5	L2	8	L2-8-1	15	YTASNKGT	BLLABBBB
C	kappa	Mus.musculus	Mo_IGKV3-2*01	84.1	Mo_IGKV3-2*01	85.7	L3	9	L3-9-*	-1	QQTKEVPYG	BLBABEBBB
C	kappa	Mus.musculus	Mo_IGKV3-2*01	84.1	Mo_IGKV3-2*01	100.0	L4	6	L4-6-*	-1	GSGTDF	EBBLBB
E	heavy	Mus.musculus	Mo_IGHV5S21*01	71.4	Mo_IGHV5S21*01	76.9	H1	13	H1-13-*	-1	AASGFTGSDYDMS	BBBLELAAABBBB
E	heavy	Mus.musculus	Mo_IGHV5S21*01	71.4	Mo_IGHV5S21*01	30.0	H2	10	H2-10-*	-1	GILGGSERSY	BBBBBLLBBB
E	heavy	Mus.musculus	Mo_IGHV5S21*01	71.4	Mo_IGHV5S21*01	66.7	H3	15	H3-15-*	-1	ARHSWGayvqygmdG
E	heavy	Mus.musculus	Mo_IGHV5S21*01	71.4	Mo_IGHV5S21*01	75.0	H4	8	H4-8-1	17	RDNSRKTL	BBAAALBB
F	kappa	Mus.musculus	Mo_IGKV3-2*01	84.1	Mo_IGKV3-2*01	80.0	L1	15	L1-15-*	-1	RASESVSnyginfIN
F	kappa	Mus.musculus	Mo_IGKV3-2*01	84.1	Mo_IGKV3-2*01	62.5	L2	8	L2-8-1	15	YTASNKGT	BLLABBBB
F	kappa	Mus.musculus	Mo_IGKV3-2*01	84.1	Mo_IGKV3-2*01	85.7	L3	9	L3-9-cis7-*	-1	QQTKEVPYG	BBBABEBBB
F	kappa	Mus.musculus	Mo_IGKV3-2*01	84.1	Mo_IGKV3-2*01	100.0	L4	6	L4-6-*	-1	GSGTDF	EBBLBB
H	heavy	Mus.musculus	Mo_IGHV5S21*01	71.4	Mo_IGHV5S21*01	76.9	H1	13	H1-13-*	-1	AASGFTGSDYDMS	BBBLELAAABBBB
H	heavy	Mus.musculus	Mo_IGHV5S21*01	71.4	Mo_IGHV5S21*01	30.0	H2	10	H2-10-*	-1	GILGGSERSY	BBBBBLLBBB
H	heavy	Mus.musculus	Mo_IGHV5S21*01	71.4	Mo_IGHV5S21*01	66.7	H3	15	H3-15-*	-1	ARHSWGayvqygmdG
H	heavy	Mus.musculus	Mo_IGHV5S21*01	71.4	Mo_IGHV5S21*01	75.0	H4	8	H4-8-*	-1	RDNSRKTL	BBAAALBB
I	kappa	Mus.musculus	Mo_IGKV3-2*01	84.1	Mo_IGKV3-2*01	80.0	L1	15	L1-15-*	-1	RASESVSnyginfIN
I	kappa	Mus.musculus	Mo_IGKV3-2*01	84.1	Mo_IGKV3-2*01	62.5	L2	8	L2-8-1	18	YTASNKGT	BLLABBBB
I	kappa	Mus.musculus	Mo_IGKV3-2*01	84.1	Mo_IGKV3-2*01	85.7	L3	9	L3-9-cis7-*	-1	QQTKEVPYG	BBBABEBBB
I	kappa	Mus.musculus	Mo_IGKV3-2*01	84.1	Mo_IGKV3-2*01	100.0	L4	6	L4-6-*	-1	GSGTDF	EELLBB
K	heavy	Mus.musculus	Mo_IGHV5S21*01	71.4	Mo_IGHV5S21*01	76.9	H1	13	H1-13-*	-1	AASGFTGSDYDMS	BBBLELAAABBBB
K	heavy	Mus.musculus	Mo_IGHV5S21*01	71.4	Mo_IGHV5S21*01	30.0	H2	10	H2-10-*	-1	GILGGSERSY	BBBBBLLBBB
K	heavy	Mus.musculus	Mo_IGHV5S21*01	71.4	Mo_IGHV5S21*01	66.7	H3	15	H3-15-*	-1	ARHSWGayvqygmdG
K	heavy	Mus.musculus	Mo_IGHV5S21*01	71.4	Mo_IGHV5S21*01	75.0	H4	8	H4-8-*	-1	RDNSRKTL	BBAABLBB
L	kappa	Mus.musculus	Mo_IGKV3-2*01	84.1	Mo_IGKV3-2*01	80.0	L1	15	L1-15-*	-1	RASESVSnyginfIN
L	kappa	Mus.musculus	Mo_IGKV3-2*01	84.1	Mo_IGKV3-2*01	62.5	L2	8	L2-8-1	17	YTASNKGT	BLLABBBB
L	kappa	Mus.musculus	Mo_IGKV3-2*01	84.1	Mo_IGKV3-2*01	85.7	L3	9	L3-9-cis7-*	-1	QQTKEVPYG	ABBABEBBB
L	kappa	Mus.musculus	Mo_IGKV3-2*01	84.1	Mo_IGKV3-2*01	100.0	L4	6	L4-6-*	-1	GSGTDF	BBBLBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022