PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 4ETQ

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Mus.musculus	Mo_IGHV1S82*01	90.2	Mo_IGHV1S82*01	76.9	H1	13	H1-13-1	7	KASGYSFNFYWMH	BBBLBBAAABBBB
A	heavy	Mus.musculus	Mo_IGHV1S82*01	90.2	Mo_IGHV1S82*01	70.0	H2	10	H2-10-1	8	MIDPSESESR	BBBAAALBBB
A	heavy	Mus.musculus	Mo_IGHV1S82*01	90.2	Mo_IGHV1S82*01	0.0	H3	12	H3-12-*	-1	TRSNYRYDYFDV	BBBBAABBBBAB
A	heavy	Mus.musculus	Mo_IGHV1S82*01	90.2	Mo_IGHV1S82*01	87.5	H4	8	H4-8-1	7	VDRSSSTA	BBAAALBB
B	kappa	Mus.musculus	Mo_IGKV4-55*01	92.8	Mo_IGKV4-55*01	100.0	L1	10	L1-10-1	9	SASSSVSYMY	BBABBBABBB
B	kappa	Mus.musculus	Mo_IGKV4-55*01	92.8	Mo_IGKV4-55*01	100.0	L2	8	L2-8-1	4	YDTSNLAS	BLLABBBB
B	kappa	Mus.musculus	Mo_IGKV4-55*01	92.8	Mo_IGKV4-55*01	75.0	L3	9	L3-9-cis7-1	8	QQWTSYPLT	BBAABBbBB
B	kappa	Mus.musculus	Mo_IGKV4-55*01	92.8	Mo_IGKV4-55*01	100.0	L4	6	L4-6-1	7	GSGTSY	EBEABB
H	heavy	Mus.musculus	Mo_IGHV1S82*01	90.2	Mo_IGHV1S82*01	76.9	H1	13	H1-13-1	7	KASGYSFNFYWMH	BBBLBBAAABBBB
H	heavy	Mus.musculus	Mo_IGHV1S82*01	90.2	Mo_IGHV1S82*01	70.0	H2	10	H2-10-1	10	MIDPSESESR	BBBAAALBBB
H	heavy	Mus.musculus	Mo_IGHV1S82*01	90.2	Mo_IGHV1S82*01	0.0	H3	12	H3-12-*	-1	TRSNYRYDYFDV	BBBBAABBBBAB
H	heavy	Mus.musculus	Mo_IGHV1S82*01	90.2	Mo_IGHV1S82*01	87.5	H4	8	H4-8-1	8	VDRSSSTA	BBAAALBB
L	kappa	Mus.musculus	Mo_IGKV4-55*01	92.8	Mo_IGKV4-55*01	100.0	L1	10	L1-10-1	10	SASSSVSYMY	BBABBBABBB
L	kappa	Mus.musculus	Mo_IGKV4-55*01	92.8	Mo_IGKV4-55*01	100.0	L2	8	L2-8-1	5	YDTSNLAS	BLEABBBB
L	kappa	Mus.musculus	Mo_IGKV4-55*01	92.8	Mo_IGKV4-55*01	75.0	L3	9	L3-9-cis7-1	8	QQWTSYPLT	BBAABBbBB
L	kappa	Mus.musculus	Mo_IGKV4-55*01	92.8	Mo_IGKV4-55*01	100.0	L4	6	L4-6-1	8	GSGTSY	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022