PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 4EDW

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Homo.sapiens	Hu_IGHV4-61*08	94.5	Mo_IGHV2-6-7*01	76.9	H1	13	H1-13-1	13	TVSGFSLIGYDLN	BBBLBBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV4-61*08	94.5	Mo_IGHV2-6-7*01	77.8	H2	9	H2-9-1	12	IIWGDGTTD	BBBAALBBB
H	heavy	Homo.sapiens	Hu_IGHV4-61*08	94.5	Hu_IGHV4-61*08	100.0	H3	15	H3-15-*	-1	ARGGYwYATSYYFDY
H	heavy	Homo.sapiens	Hu_IGHV4-61*08	94.5	Hu_IGHV4-61*08	87.5	H4	8	H4-8-1	6	KDTSKNQF	BBAAALBB
L	kappa	Homo.sapiens	Hu_IGKV1-33*01	100.0	Mo_IGKV10-94*03	81.8	L1	11	L1-11-1	8	RASQSISNNLN	BBABBAEABBB
L	kappa	Homo.sapiens	Hu_IGKV1-33*01	100.0	Mo_IGKV10-94*03	87.5	L2	8	L2-8-1	10	YYTSRFHS	BLLABBBB
L	kappa	Homo.sapiens	Hu_IGKV1-33*01	100.0	Hu_IGKV1-33*01	57.1	L3	9	L3-9-cis7-1	7	QQEHTLPYT	BBAABBbBB
L	kappa	Homo.sapiens	Hu_IGKV1-33*01	100.0	Hu_IGKV1-33*01	100.0	L4	6	L4-6-1	9	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022