PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 4DGV

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Homo.sapiens	Hu_IGHV3-33*01	87.7	Hu_IGHV3-33*01	76.9	H1	13	H1-13-1	9	TASGFTFNNYGMH	BBBLBBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV3-33*01	87.7	Hu_IGHV3-33*01	70.0	H2	10	H2-10-*	-1	VIWFDENNKY	BBBABAABBB
H	heavy	Homo.sapiens	Hu_IGHV3-33*01	87.7	Hu_IGHV3-33*01	100.0	H3	16	H3-16-*	-1	ARDISLVrdAFIYFDF
H	heavy	Homo.sapiens	Hu_IGHV3-33*01	87.7	Hu_IGHV3-33*01	100.0	H4	8	H4-8-1	4	RDNSKNTL	BBAAALBB
L	kappa	Homo.sapiens	Hu_IGKV3-11*01	97.1	Hu_IGKV3-11*01	100.0	L1	11	L1-11-1	4	RASQSVSSYLA	BBABBAEABBB
L	kappa	Homo.sapiens	Hu_IGKV3-11*01	97.1	Hu_IGKV3-11*01	100.0	L2	8	L2-8-1	3	YDASNRAT	BLLABBBB
L	kappa	Homo.sapiens	Hu_IGKV3-11*01	97.1	Hu_IGKV3-11*01	85.7	L3	8	L3-8-1	8	QQRSNWIT	BBAABEBB
L	kappa	Homo.sapiens	Hu_IGKV3-11*01	97.1	Hu_IGKV3-11*01	100.0	L4	6	L4-6-1	8	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022