PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 4DAG

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Homo.sapiens	Hu_IGHV3-66*01	84.9	Hu_IGHV3-66*01	92.3	H1	13	H1-13-*	-1	AASGFTVSSSYMS	BBBLBBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV3-66*01	84.9	Hu_IGHV3-66*01	77.8	H2	9	H2-9-*	-1	VFYSGGTTY	BBALALBBB
H	heavy	Homo.sapiens	Hu_IGHV3-66*01	84.9	Hu_IGHV3-66*01	100.0	H3	16	H3-16-*	-1	ARVLSraSGMPDAFDI
H	heavy	Homo.sapiens	Hu_IGHV3-66*01	84.9	Hu_IGHV3-66*01	75.0	H4	8	H4-8-*	-1	MDTSKNTL	BALAALBB
L	lambda	Homo.sapiens	Hu_IGLV3-1*01	96.9	Hu_IGLV3-1*01	90.9	L1	11	L1-11-*	-1	SGDKLGDKYAS	BBEBABbBBBB
L	lambda	Homo.sapiens	Hu_IGLV3-1*01	96.9	Hu_IGLV3-1*01	87.5	L2	8	L2-8-*	-1	YQDSERPS	AAELBBBB
L	lambda	Homo.sapiens	Hu_IGLV3-1*01	96.9	Hu_IGLV3-1*01	100.0	L3	9	L3-9-*	-1	QAWDSSTAV	BBBBEBEBB
L	lambda	Homo.sapiens	Hu_IGLV3-1*01	96.9	Hu_IGLV3-1*01	100.0	L4	6	L4-6-2	17	NSGNTA	BBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022