PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 4D3C

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Oryctolagus.cuniculus	Rb_IGHV1S7*01	76.4	Rb_IGHV1S7*01	84.6	H1	13	H1-13-*	-1	KASGFTFSTYYMS	BBBLBBAalBBBB
H	heavy	Oryctolagus.cuniculus	Rb_IGHV1S7*01	76.4	Rb_IGHV1S7*01	40.0	H2	10	H2-10-1	14	YIGTSSGTTY	BBBAAALBBB
H	heavy	Oryctolagus.cuniculus	Rb_IGHV1S7*01	76.4	Rb_IGHV1S7*01	100.0	H3	9	H3-9-*	-1	ARGLGRINL	BBEAABBAB
H	heavy	Oryctolagus.cuniculus	Rb_IGHV1S7*01	76.4	Rb_IGHV1S7*01	75.0	H4	8	H4-8-1	5	SDNAQNTV	BBAAALBB
L	kappa	Oryctolagus.cuniculus.Homo.sapiens	Rb_IGKV1S21*01	92.4	Rb_IGKV1S21*01	100.0	L1	11	L1-11-2	14	QASQSVSNLLA	BBABBALLBBB
L	kappa	Oryctolagus.cuniculus.Homo.sapiens	Rb_IGKV1S21*01	92.4	Rb_IGKV1S21*01	100.0	L2	8	L2-8-4	14	YGASNLES	BEAABBBB
L	kappa	Oryctolagus.cuniculus.Homo.sapiens	Rb_IGKV1S21*01	92.4	Rb_IGKV1S21*01	0.0	L3	10	L3-10-cis78-*	-1	QSgYYSAGAT	BBBBABbEBB
L	kappa	Oryctolagus.cuniculus.Homo.sapiens	Rb_IGKV1S21*01	92.4	Rb_IGKV1S21*01	83.3	L4	6	L4-6-1	15	GSGTEF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022