PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 4CAU

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence
D	kappa	Homo.sapiens	Hu_IGKV3-20*01	89.9	CDRLenMismatch	-1.0	L1	11	L1-11-*	-1	RASQNVYSYLG
D	kappa	Homo.sapiens	Hu_IGKV3-20*01	89.9	Hu_IGKV3-20*01	62.5	L2	8	L2-8-*	-1	FGVTSRAT
D	kappa	Homo.sapiens	Hu_IGKV3-20*01	89.9	Hu_IGKV3-20*01	57.1	L3	9	L3-9-*	-1	QQYAGSAYT
D	kappa	Homo.sapiens	Hu_IGKV3-20*01	89.9	Hu_IGKV3-20*01	100.0	L4	6	L4-6-*	-1	GSGTDF
D	heavy	Homo.sapiens	Hu_IGHV3-33*01	84.9	Hu_IGHV3-33*01	92.3	H1	13	H1-13-*	-1	AASGFSFSSYGMH
D	heavy	Homo.sapiens	Hu_IGHV3-33*01	84.9	Hu_IGHV3-33*01	80.0	H2	10	H2-10-*	-1	VIWYDGSKTY
D	heavy	Homo.sapiens	Hu_IGHV3-33*01	84.9	Hu_IGHV3-33*01	100.0	H3	15	H3-15-*	-1	ARGIAGgWAFWGIDL
D	heavy	Homo.sapiens	Hu_IGHV3-33*01	84.9	Hu_IGHV3-33*01	50.0	H4	8	H4-8-*	-1	KDNSKKMV
E	heavy	Homo.sapiens	Hu_IGHV3-33*01	84.9	Hu_IGHV3-33*01	92.3	H1	13	H1-13-*	-1	AASGFSFSSYGMH
E	heavy	Homo.sapiens	Hu_IGHV3-33*01	84.9	Hu_IGHV3-33*01	80.0	H2	10	H2-10-*	-1	VIWYDGSKTY
E	heavy	Homo.sapiens	Hu_IGHV3-33*01	84.9	Hu_IGHV3-33*01	100.0	H3	15	H3-15-*	-1	ARGIAGgWAFWGIDL
E	heavy	Homo.sapiens	Hu_IGHV3-33*01	84.9	Hu_IGHV3-33*01	50.0	H4	8	H4-8-*	-1	KDNSKKMV
E	kappa	Homo.sapiens	Hu_IGKV3-20*01	89.9	CDRLenMismatch	-1.0	L1	11	L1-11-*	-1	RASQNVYSYLG
E	kappa	Homo.sapiens	Hu_IGKV3-20*01	89.9	Hu_IGKV3-20*01	62.5	L2	8	L2-8-*	-1	FGVTSRAT
E	kappa	Homo.sapiens	Hu_IGKV3-20*01	89.9	Hu_IGKV3-20*01	57.1	L3	9	L3-9-*	-1	QQYAGSAYT
E	kappa	Homo.sapiens	Hu_IGKV3-20*01	89.9	Hu_IGKV3-20*01	100.0	L4	6	L4-6-*	-1	GSGTDF

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022