PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 4C83

#CDRs = 8; #Clusters = 9.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Mus.musculus	Mo_IGHV5-17*02	98.6	Mo_IGHV5-17*02	84.6	H1	13	H1-13-1	9	AASGFTFRRFGMH	BBBLBBAAABBBB
A	heavy	Mus.musculus	Mo_IGHV5-17*02	98.6	Mo_IGHV5-17*02	80.0	H2	10	H2-10-2	9	YIGGGSSTIY	BBBAALABBB
A	heavy	Mus.musculus	Mo_IGHV5-17*02	98.6	Mo_IGHV5-17*02	50.0	H3	11	H3-11-*	-1	TRDETGSWFAY	BBBBBLLBBAB
A	heavy	Mus.musculus	Mo_IGHV5-17*02	98.6	Mo_IGHV5-17*02	100.0	H4	8	H4-8-1	6	RDNPKNTL	BBAAALBB
B	kappa	Mus.musculus	Mo_IGKV4-59*01	92.8	Mo_IGKV4-59*01	90.0	L1	10	L1-10-1	8	SASSSVRYMH	BBABBBABBB
B	kappa	Mus.musculus	Mo_IGKV4-59*01	92.8	Mo_IGKV4-59*01	100.0	L2	8	L2-8-1	8	YDTSKLAS	BLEABBBB
B	kappa	Mus.musculus	Mo_IGKV4-59*01	92.8	Mo_IGKV4-59*01	62.5	L3	10	L3-10-*	-1	QQWNGYpPLT	BBBALBBbBB
B	kappa	Mus.musculus	Mo_IGKV4-59*01	92.8	Mo_IGKV4-59*01	100.0	L4	6	L4-6-*	-1	GSGTSY	EBEBLB
C	heavy	Mus.musculus	Mo_IGHV5-17*02	98.6	Mo_IGHV5-17*02	84.6	H1	13	H1-13-1	10	AASGFTFRRFGMH	BBBLBBAAABBBB
C	heavy	Mus.musculus	Mo_IGHV5-17*02	98.6	Mo_IGHV5-17*02	80.0	H2	10	H2-10-2	10	YIGGGSSTIY	BBBAALABBB
C	heavy	Mus.musculus	Mo_IGHV5-17*02	98.6	Mo_IGHV5-17*02	50.0	H3	11	H3-11-*	-1	TRDETGSWFAY	BBBBBLLBBAB
C	heavy	Mus.musculus	Mo_IGHV5-17*02	98.6	Mo_IGHV5-17*02	100.0	H4	8	H4-8-1	16	RDNPKNTL	BBAAALBB
D	kappa	Mus.musculus	Mo_IGKV4-59*01	92.8	Mo_IGKV4-59*01	90.0	L1	10	L1-10-1	12	SASSSVRYMH	BBABBBABBB
D	kappa	Mus.musculus	Mo_IGKV4-59*01	92.8	Mo_IGKV4-59*01	100.0	L2	8	L2-8-1	8	YDTSKLAS	BLEABBBB
D	kappa	Mus.musculus	Mo_IGKV4-59*01	92.8	Mo_IGKV4-59*01	62.5	L3	10	L3-10-*	-1	QQWNGYpPLT	BBBALBBbBB
D	kappa	Mus.musculus	Mo_IGKV4-59*01	92.8	Mo_IGKV4-59*01	100.0	L4	6	L4-6-1	9	GSGTSY	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022