PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 4C2I

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence
H	heavy	Homo.sapiens	Hu_IGHV3-33*01	97.3	Hu_IGHV3-33*01	92.3	H1	13	H1-13-*	-1	AASGFTFSAYGMH
H	heavy	Homo.sapiens	Hu_IGHV3-33*01	97.3	Hu_IGHV3-33*01	90.0	H2	10	H2-10-*	-1	IIWYDGSNKY
H	heavy	Homo.sapiens	Hu_IGHV3-33*01	97.3	Hu_IGHV3-33*01	100.0	H3	18	H3-18-*	-1	ARDKNPgtkpYYHYGMDV
H	heavy	Homo.sapiens	Hu_IGHV3-33*01	97.3	Hu_IGHV3-33*01	100.0	H4	8	H4-8-*	-1	RDNSKNTL
L	lambda	Homo.sapiens	Hu_IGLV1-36*01	97.1	Hu_IGLV1-36*01	100.0	L1	13	L1-13-*	-1	SGSSSNIGNNAVN
L	lambda	Homo.sapiens	Hu_IGLV1-36*01	97.1	Hu_IGLV1-36*01	100.0	L2	8	L2-8-*	-1	YYDDLLPS
L	lambda	Homo.sapiens	Hu_IGLV1-36*01	97.1	Hu_IGLV1-36*01	88.9	L3	11	L3-11-*	-1	AAWDDSLIGVV
L	lambda	Homo.sapiens	Hu_IGLV1-36*01	97.1	Hu_IGLV1-36*01	100.0	L4	6	L4-6-*	-1	KSGTSA
M	heavy	Homo.sapiens	Hu_IGHV3-33*01	97.3	Hu_IGHV3-33*01	92.3	H1	13	H1-13-*	-1	AASGFTFSAYGMH
M	heavy	Homo.sapiens	Hu_IGHV3-33*01	97.3	Hu_IGHV3-33*01	90.0	H2	10	H2-10-*	-1	IIWYDGSNKY
M	heavy	Homo.sapiens	Hu_IGHV3-33*01	97.3	Hu_IGHV3-33*01	100.0	H3	18	H3-18-*	-1	ARDKNPgtkpYYHYGMDV
M	heavy	Homo.sapiens	Hu_IGHV3-33*01	97.3	Hu_IGHV3-33*01	100.0	H4	8	H4-8-*	-1	RDNSKNTL
N	lambda	Homo.sapiens	Hu_IGLV1-36*01	97.1	Hu_IGLV1-36*01	100.0	L1	13	L1-13-*	-1	SGSSSNIGNNAVN
N	lambda	Homo.sapiens	Hu_IGLV1-36*01	97.1	Hu_IGLV1-36*01	100.0	L2	8	L2-8-*	-1	YYDDLLPS
N	lambda	Homo.sapiens	Hu_IGLV1-36*01	97.1	Hu_IGLV1-36*01	88.9	L3	11	L3-11-*	-1	AAWDDSLIGVV
N	lambda	Homo.sapiens	Hu_IGLV1-36*01	97.1	Hu_IGLV1-36*01	100.0	L4	6	L4-6-*	-1	KSGTSA

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022