PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 4BKL

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Mus.musculus	Mo_IGHV1-7*01	90.4	Mo_IGHV1-7*01	84.6	H1	13	H1-13-1	13	KASGYTFISYWMN	BBBLBBAAABBBB
A	heavy	Mus.musculus	Mo_IGHV1-7*01	90.4	Mo_IGHV1-7*01	70.0	H2	10	H2-10-1	16	AINPSDGYTE	BBBAAALBBB
A	heavy	Mus.musculus	Mo_IGHV1-7*01	90.4	Mo_IGHV1-7*01	100.0	H3	9	H3-9-*	-1	ARYGGYFDY	BBBBLBBAB
A	heavy	Mus.musculus	Mo_IGHV1-7*01	90.4	Mo_IGHV1-7*01	87.5	H4	8	H4-8-1	12	ADRSSSTA	BBAAALBB
B	kappa	Mus.musculus	Mo_IGKV3-1*01	100.0	Mo_IGKV3-1*01	93.3	L1	15	L1-15-*	-1	RASESVEyfgtSLMQ	BBABBBBBEABBBBB
B	kappa	Mus.musculus	Mo_IGKV3-1*01	100.0	Mo_IGKV3-1*01	100.0	L2	8	L2-8-1	23	YAASNVES	BLEABBBB
B	kappa	Mus.musculus	Mo_IGKV3-1*01	100.0	Mo_IGKV3-1*01	85.7	L3	9	L3-9-cis7-1	12	QQSREVPYT	BBAABBbBB
B	kappa	Mus.musculus	Mo_IGKV3-1*01	100.0	Mo_IGKV3-1*01	100.0	L4	6	L4-6-1	23	GSGTDF	BBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022