PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 4AJ0

#CDRs = 4; #Clusters = 5.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	lambda	Homo.sapiens	Hu_IGLV3-1*01	100.0	Hu_IGLV3-1*01	90.9	L1	11	L1-11-3	8	SGDKLGDKYAY	BBBLAAABBBB
A	lambda	Homo.sapiens	Hu_IGLV3-1*01	100.0	Hu_IGLV3-1*01	100.0	L2	8	L2-8-1	7	YQDSKRPS	BLLABBBB
A	lambda	Homo.sapiens	Hu_IGLV3-1*01	100.0	Hu_IGLV3-1*01	87.5	L3	10	L3-10-*	-1	QAADSSTAVV	BBBAEaEbBB
A	lambda	Homo.sapiens	Hu_IGLV3-1*01	100.0	Hu_IGLV3-1*01	100.0	L4	6	L4-6-2	11	NSGNTA	BBEABB
B	lambda	Homo.sapiens	Hu_IGLV3-1*01	100.0	Hu_IGLV3-1*01	90.9	L1	11	L1-11-3	15	SGDKLGDKYAY	BBBLAAABBBB
B	lambda	Homo.sapiens	Hu_IGLV3-1*01	100.0	Hu_IGLV3-1*01	100.0	L2	8	L2-8-1	6	YQDSKRPS	BLLABBBB
B	lambda	Homo.sapiens	Hu_IGLV3-1*01	100.0	Hu_IGLV3-1*01	87.5	L3	10	L3-10-*	-1	QAADSSTAVV	BBBBABBAEB
B	lambda	Homo.sapiens	Hu_IGLV3-1*01	100.0	Hu_IGLV3-1*01	100.0	L4	6	L4-6-2	11	NSGNTA	BBEABB
C	lambda	Homo.sapiens	Hu_IGLV3-1*01	100.0	Hu_IGLV3-1*01	90.9	L1	11	L1-11-3	9	SGDKLGDKYAY	BBBLAAABBBB
C	lambda	Homo.sapiens	Hu_IGLV3-1*01	100.0	Hu_IGLV3-1*01	100.0	L2	8	L2-8-1	12	YQDSKRPS	BLEABBBB
C	lambda	Homo.sapiens	Hu_IGLV3-1*01	100.0	Hu_IGLV3-1*01	87.5	L3	10	L3-10-*	-1	QAADSSTAVV	BBBALABBBB
C	lambda	Homo.sapiens	Hu_IGLV3-1*01	100.0	Hu_IGLV3-1*01	100.0	L4	6	L4-6-2	12	NSGNTA	BBEABB
D	lambda	Homo.sapiens	Hu_IGLV3-1*01	100.0	Hu_IGLV3-1*01	90.9	L1	11	L1-11-*	-1	SGDKLGDKYAY	BEBbAAABBBB
D	lambda	Homo.sapiens	Hu_IGLV3-1*01	100.0	Hu_IGLV3-1*01	100.0	L2	8	L2-8-1	10	YQDSKRPS	BLEABBBB
D	lambda	Homo.sapiens	Hu_IGLV3-1*01	100.0	Hu_IGLV3-1*01	87.5	L3	10	L3-10-*	-1	QAADSSTAVV	BBBAEbBBBB
D	lambda	Homo.sapiens	Hu_IGLV3-1*01	100.0	Hu_IGLV3-1*01	100.0	L4	6	L4-6-2	11	NSGNTA	BBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022