PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 4AIX

#CDRs = 4; #Clusters = 6.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	lambda	Homo.sapiens	Hu_IGLV3-1*01	100.0	Hu_IGLV3-1*01	90.9	L1	11	L1-11-3	11	SGDKLGDKYAY	BEBLAAABBBB
A	lambda	Homo.sapiens	Hu_IGLV3-1*01	100.0	Hu_IGLV3-1*01	100.0	L2	8	L2-8-1	10	YQDSKRPS	BLEABBBB
A	lambda	Homo.sapiens	Hu_IGLV3-1*01	100.0	Hu_IGLV3-1*01	100.0	L3	10	L3-10-*	-1	QAWDSSTAVV	BBBBAABBBB
A	lambda	Homo.sapiens	Hu_IGLV3-1*01	100.0	Hu_IGLV3-1*01	100.0	L4	6	L4-6-2	11	NSGNTA	BBEABB
B	lambda	Homo.sapiens	Hu_IGLV3-1*01	100.0	Hu_IGLV3-1*01	90.9	L1	11	L1-11-*	-1	SGDKLGDKYAY	BELLAAABBBB
B	lambda	Homo.sapiens	Hu_IGLV3-1*01	100.0	Hu_IGLV3-1*01	100.0	L2	8	L2-8-1	10	YQDSKRPS	BLEABBBB
B	lambda	Homo.sapiens	Hu_IGLV3-1*01	100.0	Hu_IGLV3-1*01	100.0	L3	10	L3-10-*	-1	QAWDSSTAVV	BBBBAABBBB
B	lambda	Homo.sapiens	Hu_IGLV3-1*01	100.0	Hu_IGLV3-1*01	100.0	L4	6	L4-6-2	11	NSGNTA	BBEABB
C	lambda	Homo.sapiens	Hu_IGLV3-1*01	100.0	Hu_IGLV3-1*01	90.9	L1	11	L1-11-3	9	SGDKLGDKYAY	BBBLAAABBBB
C	lambda	Homo.sapiens	Hu_IGLV3-1*01	100.0	Hu_IGLV3-1*01	100.0	L2	8	L2-8-1	7	YQDSKRPS	BLLABBBB
C	lambda	Homo.sapiens	Hu_IGLV3-1*01	100.0	Hu_IGLV3-1*01	100.0	L3	10	L3-10-*	-1	QAWDSSTAVV	BBBBAABBBB
C	lambda	Homo.sapiens	Hu_IGLV3-1*01	100.0	Hu_IGLV3-1*01	100.0	L4	6	L4-6-2	11	NSGNTA	BBEABB
D	lambda	Homo.sapiens	Hu_IGLV3-1*01	100.0	Hu_IGLV3-1*01	90.9	L1	11	L1-11-3	13	SGDKLGDKYAY	BEBLAAABBBB
D	lambda	Homo.sapiens	Hu_IGLV3-1*01	100.0	Hu_IGLV3-1*01	100.0	L2	8	L2-8-1	8	YQDSKRPS	BLLABBBB
D	lambda	Homo.sapiens	Hu_IGLV3-1*01	100.0	Hu_IGLV3-1*01	100.0	L3	10	L3-10-cis78-*	-1	QAWDSSTAVV	BBBAEbabBB
D	lambda	Homo.sapiens	Hu_IGLV3-1*01	100.0	Hu_IGLV3-1*01	100.0	L4	6	L4-6-2	14	NSGNTA	BBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022