PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 4A6Y

#CDRs = 8; #Clusters = 11.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	lambda	Mus.musculus	Mo_IGLV1*01	100.0	Mo_IGLV1*01	100.0	L1	14	L1-14-*	-1	RSSTGAVTtSNYAN	BBAAEBBBAABBBB
A	lambda	Mus.musculus	Mo_IGLV1*01	100.0	Mo_IGLV1*01	100.0	L2	8	L2-8-1	24	GGTNNRAP	BLEABBBB
A	lambda	Mus.musculus	Mo_IGLV1*01	100.0	Mo_IGLV1*01	87.5	L3	9	L3-9-4	15	ALWYSNHWV	BBBBEABBB
A	lambda	Mus.musculus	Mo_IGLV1*01	100.0	Mo_IGLV1*01	100.0	L4	6	L4-6-2	18	LIGDKA	BBEABB
B	heavy	Mus.musculus	Mo_IGHV1-72*01	100.0	Mo_IGHV1-72*01	100.0	H1	13	H1-13-*	-1	KASGYTFTSYWMH	BBBEABAAABBBB
B	heavy	Mus.musculus	Mo_IGHV1-72*01	100.0	Mo_IGHV1-72*01	90.0	H2	10	H2-10-1	21	RIDPNSGGTA	BBBAAALBBB
B	heavy	Mus.musculus	Mo_IGHV1-72*01	100.0	Mo_IGHV1-72*01	100.0	H3	13	H3-13-*	-1	ARYDYYGGSYFDY	BBBBEABLLBBAB
B	heavy	Mus.musculus	Mo_IGHV1-72*01	100.0	Mo_IGHV1-72*01	100.0	H4	8	H4-8-1	13	VDKPSSTA	BBAAALBB
H	heavy	Mus.musculus	Mo_IGHV1-72*01	97.2	Mo_IGHV1-72*01	100.0	H1	13	H1-13-*	-1	KASGYTFTSYWMH	BALABBAAABBBB
H	heavy	Mus.musculus	Mo_IGHV1-72*01	97.2	Mo_IGHV1-72*01	90.0	H2	10	H2-10-1	11	RIDPNSGGTA	BBBAAALBBB
H	heavy	Mus.musculus	Mo_IGHV1-72*01	97.2	Mo_IGHV1-72*01	100.0	H3	13	H3-13-*	-1	ARYDYYGGSYFDY	BBBAEBEEABBAB
H	heavy	Mus.musculus	Mo_IGHV1-72*01	97.2	Mo_IGHV1-72*01	100.0	H4	8	H4-8-*	-1	VDKPSSTA	BBBaALBB
L	lambda	Mus.musculus	Mo_IGLV1*01	98.5	Mo_IGLV1*01	92.9	L1	14	L1-14-1	15	ASSTGAVTtSNYAN	BBAABBBBAAALBB
L	lambda	Mus.musculus	Mo_IGLV1*01	98.5	Mo_IGLV1*01	100.0	L2	8	L2-8-1	22	GGTNNRAP	BLEABBBB
L	lambda	Mus.musculus	Mo_IGLV1*01	98.5	Mo_IGLV1*01	87.5	L3	9	L3-9-3	22	ALWYSNHWV	BBBBAABBB
L	lambda	Mus.musculus	Mo_IGLV1*01	98.5	Mo_IGLV1*01	100.0	L4	6	L4-6-2	15	LIGDKA	BBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022