PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 43CA

#CDRs = 8; #Clusters = 9.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	kappa	Mus.musculus	Mo_IGKV8-24*01	95.7	Mo_IGKV8-24*01	94.1	L1	17	L1-17-*	-1	KSSQSLlnisnqKNYLA	BBABBABBBLALBBBBB
A	kappa	Mus.musculus	Mo_IGKV8-24*01	95.7	Mo_IGKV8-24*01	100.0	L2	8	L2-8-1	8	YFASTRES	BLLABBBB
A	kappa	Mus.musculus	Mo_IGKV8-24*01	95.7	Mo_IGKV8-24*01	71.4	L3	9	L3-9-cis7-1	19	QQHYRAPRT	BBAABBbBB
A	kappa	Mus.musculus	Mo_IGKV8-24*01	95.7	Mo_IGKV8-24*01	100.0	L4	6	L4-6-1	8	GSGTDF	EBEABB
B	heavy	Mus.musculus	Mo_IGHV2-6-4*01	93.2	Mo_IGHV2-6-4*01	84.6	H1	13	H1-13-1	12	TVSGISLSRYNVH	BBBLBBAAABBBB
B	heavy	Mus.musculus	Mo_IGHV2-6-4*01	93.2	Mo_IGHV2-6-4*01	77.8	H2	9	H2-9-1	16	MIWGGGSIE	BBBAALBBB
B	heavy	Mus.musculus	Mo_IGHV2-6-4*01	93.2	Mo_IGHV2-6-4*01	0.0	H3	12	H3-12-*	-1	VSYGYGGDRFSY	BBBBBLBABABB
B	heavy	Mus.musculus	Mo_IGHV2-6-4*01	93.2	Mo_IGHV2-6-4*01	87.5	H4	8	H4-8-1	10	KDNSKSQI	BBAAALBB
C	kappa	Mus.musculus	Mo_IGKV8-24*01	95.7	Mo_IGKV8-24*01	94.1	L1	17	L1-17-1	8	KSSQSLlnisnqKNYLA	BBABBABBAAALBBBBB
C	kappa	Mus.musculus	Mo_IGKV8-24*01	95.7	Mo_IGKV8-24*01	100.0	L2	8	L2-8-1	7	YFASTRES	BLLABBBB
C	kappa	Mus.musculus	Mo_IGKV8-24*01	95.7	Mo_IGKV8-24*01	71.4	L3	9	L3-9-cis7-1	20	QQHYRAPRT	BBAABBbBB
C	kappa	Mus.musculus	Mo_IGKV8-24*01	95.7	Mo_IGKV8-24*01	100.0	L4	6	L4-6-1	9	GSGTDF	EBEABB
D	heavy	Mus.musculus	Mo_IGHV2-6-4*01	93.2	Mo_IGHV2-6-4*01	84.6	H1	13	H1-13-1	14	TVSGISLSRYNVH	BBBLBBAAABBBB
D	heavy	Mus.musculus	Mo_IGHV2-6-4*01	93.2	Mo_IGHV2-6-4*01	77.8	H2	9	H2-9-1	18	MIWGGGSIE	BBBABLBBB
D	heavy	Mus.musculus	Mo_IGHV2-6-4*01	93.2	Mo_IGHV2-6-4*01	0.0	H3	12	H3-12-*	-1	VSYGYGGDRFSY	BBBEBLBABABB
D	heavy	Mus.musculus	Mo_IGHV2-6-4*01	93.2	Mo_IGHV2-6-4*01	87.5	H4	8	H4-8-1	8	KDNSKSQI	BBAAALBB
E	kappa	Mus.musculus	Mo_IGKV8-24*01	95.7	Mo_IGKV8-24*01	94.1	L1	17	L1-17-*	-1	KSSQSLlnisnqKNYLA	BBABBABBBLALBBBBB
E	kappa	Mus.musculus	Mo_IGKV8-24*01	95.7	Mo_IGKV8-24*01	100.0	L2	8	L2-8-1	13	YFASTRES	BLLABBBB
E	kappa	Mus.musculus	Mo_IGKV8-24*01	95.7	Mo_IGKV8-24*01	71.4	L3	9	L3-9-cis7-1	21	QQHYRAPRT	BBAABBbBB
E	kappa	Mus.musculus	Mo_IGKV8-24*01	95.7	Mo_IGKV8-24*01	100.0	L4	6	L4-6-1	8	GSGTDF	EBEABB
F	heavy	Mus.musculus	Mo_IGHV2-6-4*01	93.2	Mo_IGHV2-6-4*01	84.6	H1	13	H1-13-1	19	TVSGISLSRYNVH	BBBLBBAAABBBB
F	heavy	Mus.musculus	Mo_IGHV2-6-4*01	93.2	Mo_IGHV2-6-4*01	77.8	H2	9	H2-9-1	14	MIWGGGSIE	BBBAALBBB
F	heavy	Mus.musculus	Mo_IGHV2-6-4*01	93.2	Mo_IGHV2-6-4*01	0.0	H3	12	H3-12-*	-1	VSYGYGGDRFSY	BBBEBLBABABB
F	heavy	Mus.musculus	Mo_IGHV2-6-4*01	93.2	Mo_IGHV2-6-4*01	87.5	H4	8	H4-8-1	10	KDNSKSQI	BBAAALBB
G	kappa	Mus.musculus	Mo_IGKV8-24*01	95.7	Mo_IGKV8-24*01	94.1	L1	17	L1-17-*	-1	KSSQSLlnisnqKNYLA	BBABBABBBLALBBBBB
G	kappa	Mus.musculus	Mo_IGKV8-24*01	95.7	Mo_IGKV8-24*01	100.0	L2	8	L2-8-1	12	YFASTRES	BLLABBBB
G	kappa	Mus.musculus	Mo_IGKV8-24*01	95.7	Mo_IGKV8-24*01	71.4	L3	9	L3-9-cis7-1	23	QQHYRAPRT	BBAABBbBB
G	kappa	Mus.musculus	Mo_IGKV8-24*01	95.7	Mo_IGKV8-24*01	100.0	L4	6	L4-6-1	15	GSGTDF	EBEABB
H	heavy	Mus.musculus	Mo_IGHV2-6-4*01	93.2	Mo_IGHV2-6-4*01	84.6	H1	13	H1-13-1	20	TVSGISLSRYNVH	BBBLBBAAABBBB
H	heavy	Mus.musculus	Mo_IGHV2-6-4*01	93.2	Mo_IGHV2-6-4*01	77.8	H2	9	H2-9-1	23	MIWGGGSIE	BBBABLBBB
H	heavy	Mus.musculus	Mo_IGHV2-6-4*01	93.2	Mo_IGHV2-6-4*01	0.0	H3	12	H3-12-*	-1	VSYGYGGDRFSY	BBBEBEBABABB
H	heavy	Mus.musculus	Mo_IGHV2-6-4*01	93.2	Mo_IGHV2-6-4*01	87.5	H4	8	H4-8-1	14	KDNSKSQI	BBAAALBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022