PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 3ZKX

#CDRs = 4; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
B	heavy	Lama.glama	La_IGHV1S6*01	91.8	La_IGHV1S6*01	76.9	H1	13	H1-13-1	10	AASGFTFSSAIMT	BBBLBBAAABBBB
B	heavy	Lama.glama	La_IGHV1S6*01	91.8	La_IGHV1S6*01	40.0	H2	10	H2-10-2	9	TIGSDGSITT	BBBAALABBB
B	heavy	Lama.glama	La_IGHV1S6*01	91.8	La_IGHV1S6*01	0.0	H3	6	H3-6-*	-1	TSAGRR
B	heavy	Lama.glama	La_IGHV1S6*01	91.8	La_IGHV1S6*01	75.0	H4	8	H4-8-1	3	RDNARNTL	BBAAALBB
C	heavy	Lama.glama	La_IGHV1S5*01_VHH	72.6	La_IGHV1S5*01_VHH	84.6	H1	13	H1-13-*	-1	AASGFTFSRAAMR	BBBEBBBBLBBBB
C	heavy	Lama.glama	La_IGHV1S5*01_VHH	72.6	La_IGHV1S5*01_VHH	40.0	H2	10	H2-10-*	-1	NINAGDGSAS	BBBBEBBBBB
C	heavy	Lama.glama	La_IGHV1S5*01_VHH	72.6	La_IGHV1S5*01_VHH	0.0	H3	5	H3-5-*	-1	IYNGH	BBLLB
C	heavy	Lama.glama	La_IGHV1S5*01_VHH	72.6	La_IGHV1S5*01_VHH	62.5	H4	8	H4-8-*	-1	RDKAGNRL	BBAALABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022