PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 3WKM

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Mus.musculus	Mo_IGHV14-3*02	95.9	Mo_IGHV14-3*02	92.3	H1	13	H1-13-1	18	TASGFNIKDTYLH	BBBLBBAAABBBB
H	heavy	Mus.musculus	Mo_IGHV14-3*02	95.9	Mo_IGHV14-3*02	90.0	H2	10	H2-10-1	12	RIDPANGNAK	BBBAAALBBB
H	heavy	Mus.musculus	Mo_IGHV14-3*02	95.9	Mo_IGHV14-3*02	0.0	H3	16	H3-16-*	-1	SNRQLglRGYYYAMDY
H	heavy	Mus.musculus	Mo_IGHV14-3*02	95.9	Mo_IGHV14-3*02	100.0	H4	8	H4-8-1	6	ADTSSNTA	BBAAALBB
I	heavy	Mus.musculus	Mo_IGHV14-3*02	95.9	Mo_IGHV14-3*02	92.3	H1	13	H1-13-1	18	TASGFNIKDTYLH	BBBLBBAAABBBB
I	heavy	Mus.musculus	Mo_IGHV14-3*02	95.9	Mo_IGHV14-3*02	90.0	H2	10	H2-10-1	12	RIDPANGNAK	BBBAAALBBB
I	heavy	Mus.musculus	Mo_IGHV14-3*02	95.9	Mo_IGHV14-3*02	0.0	H3	16	H3-16-*	-1	SNRQLglRGYYYAMDY
I	heavy	Mus.musculus	Mo_IGHV14-3*02	95.9	Mo_IGHV14-3*02	100.0	H4	8	H4-8-1	5	ADTSSNTA	BBAAALBB
L	kappa	Mus.musculus	Mo_IGKV3-10*01	98.5	Mo_IGKV3-10*01	93.3	L1	15	L1-15-1	11	RASESVDSYgdsfMH	BBABBABBLLBBBBB
L	kappa	Mus.musculus	Mo_IGKV3-10*01	98.5	Mo_IGKV3-10*01	100.0	L2	8	L2-8-1	5	YLASNLES	BLLABBBB
L	kappa	Mus.musculus	Mo_IGKV3-10*01	98.5	Mo_IGKV3-10*01	100.0	L3	9	L3-9-cis7-1	8	QQNNEDPWT	BBAABBbBB
L	kappa	Mus.musculus	Mo_IGKV3-10*01	98.5	Mo_IGKV3-10*01	100.0	L4	6	L4-6-1	6	GSRTDF	EBEABB
M	kappa	Mus.musculus	Mo_IGKV3-10*01	98.5	Mo_IGKV3-10*01	93.3	L1	15	L1-15-1	9	RASESVDSYgdsfMH	BBABBABBLLBBBBB
M	kappa	Mus.musculus	Mo_IGKV3-10*01	98.5	Mo_IGKV3-10*01	100.0	L2	8	L2-8-1	5	YLASNLES	BLLABBBB
M	kappa	Mus.musculus	Mo_IGKV3-10*01	98.5	Mo_IGKV3-10*01	100.0	L3	9	L3-9-cis7-1	9	QQNNEDPWT	BBAABBbBB
M	kappa	Mus.musculus	Mo_IGKV3-10*01	98.5	Mo_IGKV3-10*01	100.0	L4	6	L4-6-1	7	GSRTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022