PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 3WIH

#CDRs = 8; #Clusters = 9.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Mus.musculus	Mo_IGHV1-26*01	95.9	Mo_IGHV1-26*01	100.0	H1	13	H1-13-1	7	KASGYTFTDYYMN	BBBLBBAAABBBB
H	heavy	Mus.musculus	Mo_IGHV1-26*01	95.9	Mo_IGHV1-26*01	70.0	H2	10	H2-10-1	9	DIVPNNGDTT	BBBAAALBBB
H	heavy	Mus.musculus	Mo_IGHV1-26*01	95.9	Mo_IGHV1-26*01	100.0	H3	12	H3-12-*	-1	ARFSNYVYPFDY	BBBABAABBBAB
H	heavy	Mus.musculus	Mo_IGHV1-26*01	95.9	Mo_IGHV1-26*01	100.0	H4	8	H4-8-1	7	VDKSSSTA	BBAAALBB
I	heavy	Mus.musculus	Mo_IGHV1-26*01	95.9	Mo_IGHV1-26*01	100.0	H1	13	H1-13-1	7	KASGYTFTDYYMN	BBBLBBAAABBBB
I	heavy	Mus.musculus	Mo_IGHV1-26*01	95.9	Mo_IGHV1-26*01	70.0	H2	10	H2-10-1	9	DIVPNNGDTT	BBBAAALBBB
I	heavy	Mus.musculus	Mo_IGHV1-26*01	95.9	Mo_IGHV1-26*01	100.0	H3	12	H3-12-*	-1	ARFSNYVYPFDY	BBBABAABBBAB
I	heavy	Mus.musculus	Mo_IGHV1-26*01	95.9	Mo_IGHV1-26*01	100.0	H4	8	H4-8-1	6	VDKSSSTA	BBAAALBB
L	kappa	Mus.musculus	Mo_IGKV10-96*01	97.1	Mo_IGKV10-96*01	90.9	L1	11	L1-11-1	6	RASQDISNFLN	BBABBAEABBB
L	kappa	Mus.musculus	Mo_IGKV10-96*01	97.1	Mo_IGKV10-96*01	100.0	L2	8	L2-8-1	5	YYTSRLHS	BLEABBBB
L	kappa	Mus.musculus	Mo_IGKV10-96*01	97.1	Mo_IGKV10-96*01	100.0	L3	9	L3-9-cis7-1	5	QQGNTLPLT	BBAABBbBB
L	kappa	Mus.musculus	Mo_IGKV10-96*01	97.1	Mo_IGKV10-96*01	83.3	L4	6	L4-6-*	-1	GSGTDF	BAEABB
M	kappa	Mus.musculus	Mo_IGKV10-96*01	97.1	Mo_IGKV10-96*01	90.9	L1	11	L1-11-1	6	RASQDISNFLN	BBABBAEABBB
M	kappa	Mus.musculus	Mo_IGKV10-96*01	97.1	Mo_IGKV10-96*01	100.0	L2	8	L2-8-1	5	YYTSRLHS	BLEABBBB
M	kappa	Mus.musculus	Mo_IGKV10-96*01	97.1	Mo_IGKV10-96*01	100.0	L3	9	L3-9-cis7-1	6	QQGNTLPLT	BBAABBbBB
M	kappa	Mus.musculus	Mo_IGKV10-96*01	97.1	Mo_IGKV10-96*01	83.3	L4	6	L4-6-2	28	GSGTDF	BBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022