PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 3WFE

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Mus.musculus	Mo_IGHV1-5*01	100.0	Mo_IGHV1-5*01	84.6	H1	13	H1-13-1	10	KASGYSFTSYWMH	BBBLBBAAABBBB
H	heavy	Mus.musculus	Mo_IGHV1-5*01	100.0	Mo_IGHV1-5*01	90.0	H2	10	H2-10-1	12	AVYPGNSDTS	BBBAAALBBB
H	heavy	Mus.musculus	Mo_IGHV1-5*01	100.0	Mo_IGHV1-5*01	50.0	H3	17	H3-17-*	-1	SRSSldgYYVKNWCFDV
H	heavy	Mus.musculus	Mo_IGHV1-5*01	100.0	Mo_IGHV1-5*01	100.0	H4	8	H4-8-1	8	AVTSASTA	BBAAALBB
L	kappa	Mus.musculus	Mo_IGKV16-104*01	94.2	Mo_IGKV16-104*01	90.9	L1	11	L1-11-1	7	RASKSIRKYLA	BBABBAEABBB
L	kappa	Mus.musculus	Mo_IGKV16-104*01	94.2	Mo_IGKV16-104*01	87.5	L2	8	L2-8-1	7	YSGSTLQF	BLLABBBB
L	kappa	Mus.musculus	Mo_IGKV16-104*01	94.2	Mo_IGKV16-104*01	87.5	L3	9	L3-9-cis7-1	10	QQHNEYPLT	BBAABBbBB
L	kappa	Mus.musculus	Mo_IGKV16-104*01	94.2	Mo_IGKV16-104*01	83.3	L4	6	L4-6-1	10	GSGTEF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022