PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 3VG9

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
B	kappa	Mus.musculus	Mo_IGKV12-46*01	87.0	Mo_IGKV12-46*01	72.7	L1	11	L1-11-1	15	RASEFIYSSLT	BBABBAEABBB
B	kappa	Mus.musculus	Mo_IGKV12-46*01	87.0	Mo_IGKV12-46*01	100.0	L2	8	L2-8-1	12	YAATNLAD	BLLABBBB
B	kappa	Mus.musculus	Mo_IGKV12-46*01	87.0	Mo_IGKV12-46*01	57.1	L3	9	L3-9-*	-1	QHFYGSTWA	BBABEABBB
B	kappa	Mus.musculus	Mo_IGKV12-46*01	87.0	Mo_IGKV12-46*01	83.3	L4	6	L4-6-1	11	GSGTQF	EBEABB
C	heavy	Mus.musculus	Mo_IGHV1-39*01	91.8	Mo_IGHV1-39*01	76.9	H1	13	H1-13-1	10	KTSGDSFTAYNMN	BBBLBBAAABBBB
C	heavy	Mus.musculus	Mo_IGHV1-39*01	91.8	Mo_IGHV1-39*01	60.0	H2	10	H2-10-1	7	NINPYYGSTR	BBBAAALBBB
C	heavy	Mus.musculus	Mo_IGHV1-39*01	91.8	Mo_IGHV1-39*01	100.0	H3	17	H3-17-*	-1	AREGNYYdggSVRYFDY
C	heavy	Mus.musculus	Mo_IGHV1-39*01	91.8	Mo_IGHV1-39*01	87.5	H4	8	H4-8-1	7	VDKSSSTA	BBAAALBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022