PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 3VE0

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Mus.musculus	Mo_IGHV5-12-1*01	91.8	Mo_IGHV5-12-1*01	76.9	H1	13	H1-13-1	21	AASGFAFNYYDMF	BBBLBBAAABBBB
A	heavy	Mus.musculus	Mo_IGHV5-12-1*01	91.8	Mo_IGHV5-12-1*01	80.0	H2	10	H2-10-2	18	YINSGGGNTY	BBBAALABBB
A	heavy	Mus.musculus	Mo_IGHV5-12-1*01	91.8	Mo_IGHV5-12-1*01	100.0	H3	12	H3-12-3	16	ARQLYGNSFFDY	BBBBBLBABBAB
A	heavy	Mus.musculus	Mo_IGHV5-12-1*01	91.8	Mo_IGHV5-12-1*01	87.5	H4	8	H4-8-1	11	RDNAKKTL	BBAAALBB
B	kappa	Mus.musculus	Mo_IGKV6-25*01	91.3	Mo_IGKV6-25*01	90.9	L1	11	L1-11-1	18	KASQDVTTAVA	BBABBAEABBB
B	kappa	Mus.musculus	Mo_IGKV6-25*01	91.3	Mo_IGKV6-25*01	100.0	L2	8	L2-8-1	10	YWASTRHT	BLLABBBB
B	kappa	Mus.musculus	Mo_IGKV6-25*01	91.3	Mo_IGKV6-25*01	100.0	L3	9	L3-9-cis7-1	13	QQHYSTPLT	BBAABBbBB
B	kappa	Mus.musculus	Mo_IGKV6-25*01	91.3	Mo_IGKV6-25*01	66.7	L4	6	L4-6-1	10	GSGTAF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022