PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 3V7A

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
E	heavy	Mus.musculus	Mo_IGHV1-54*03	97.3	Mo_IGHV1-54*03	100.0	H1	13	H1-13-1	9	KASGYAFTNYLIE	BBBLBBAAABBBB
E	heavy	Mus.musculus	Mo_IGHV1-54*03	97.3	Mo_IGHV1-54*03	80.0	H2	10	H2-10-1	21	VINPRSGDTN	BBBAAALBBB
E	heavy	Mus.musculus	Mo_IGHV1-54*03	97.3	Mo_IGHV1-54*03	100.0	H3	13	H3-13-*	-1	ARSGTTAYFAMDY	BBBBAAALLBBAB
E	heavy	Mus.musculus	Mo_IGHV1-54*03	97.3	Mo_IGHV1-54*03	100.0	H4	8	H4-8-1	11	ADKSSSTA	BBAAALBB
F	heavy	Mus.musculus	Mo_IGHV1-54*03	97.3	Mo_IGHV1-54*03	100.0	H1	13	H1-13-1	9	KASGYAFTNYLIE	BBBLBBAAABBBB
F	heavy	Mus.musculus	Mo_IGHV1-54*03	97.3	Mo_IGHV1-54*03	80.0	H2	10	H2-10-1	20	VINPRSGDTN	BBBAAALBBB
F	heavy	Mus.musculus	Mo_IGHV1-54*03	97.3	Mo_IGHV1-54*03	100.0	H3	13	H3-13-*	-1	ARSGTTAYFAMDY	BBBBAAALLBBAB
F	heavy	Mus.musculus	Mo_IGHV1-54*03	97.3	Mo_IGHV1-54*03	100.0	H4	8	H4-8-1	12	ADKSSSTA	BBAAALBB
G	kappa	Mus.musculus	Mo_IGKV12-44*01	100.0	Mo_IGKV12-44*01	100.0	L1	11	L1-11-2	16	RASENIYSYLA	BBABBALLBBB
G	kappa	Mus.musculus	Mo_IGKV12-44*01	100.0	Mo_IGKV12-44*01	87.5	L2	8	L2-8-1	15	YNVKTLAE	BLEABBBB
G	kappa	Mus.musculus	Mo_IGKV12-44*01	100.0	Mo_IGKV12-44*01	85.7	L3	10	L3-10-*	-1	QHHYgSPPWT	BBABEBBbBB
G	kappa	Mus.musculus	Mo_IGKV12-44*01	100.0	Mo_IGKV12-44*01	100.0	L4	6	L4-6-1	11	GSGTQF	EBEABB
H	kappa	Mus.musculus	Mo_IGKV12-44*01	100.0	Mo_IGKV12-44*01	100.0	L1	11	L1-11-2	16	RASENIYSYLA	BBABBALLBBB
H	kappa	Mus.musculus	Mo_IGKV12-44*01	100.0	Mo_IGKV12-44*01	87.5	L2	8	L2-8-1	15	YNVKTLAE	BLEABBBB
H	kappa	Mus.musculus	Mo_IGKV12-44*01	100.0	Mo_IGKV12-44*01	85.7	L3	10	L3-10-*	-1	QHHYgSPPWT	BBABEBBbBB
H	kappa	Mus.musculus	Mo_IGKV12-44*01	100.0	Mo_IGKV12-44*01	100.0	L4	6	L4-6-1	11	GSGTQF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022