PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 3V0V

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Mus.musculus	Mo_IGHV7-3*04	91.8	Mo_IGHV7-3*04	84.6	H1	13	H1-13-1	10	AASGFTFSDYYMT	BBBLBBAAABBBB
A	heavy	Mus.musculus	Mo_IGHV7-3*04	91.8	Mo_IGHV7-3*04	75.0	H2	12	H2-12-1	10	LIRNKrnGDTAE	BBBBAAALLBBB
A	heavy	Mus.musculus	Mo_IGHV7-3*04	91.8	Mo_IGHV7-3*04	33.3	H3	11	H3-11-*	-1	VRQGRGYTLDY	BBBBBLLALAB
A	heavy	Mus.musculus	Mo_IGHV7-3*04	91.8	Mo_IGHV7-3*04	75.0	H4	8	H4-8-1	10	RDYSRSIL	BBAAALBB
B	kappa	Mus.musculus	Mo_IGKV15-103*01	94.2	Mo_IGKV15-103*01	81.8	L1	11	L1-11-1	7	RASQNINIWLS	BBABBAEABBB
B	kappa	Mus.musculus	Mo_IGKV15-103*01	94.2	Mo_IGKV15-103*01	100.0	L2	8	L2-8-*	-1	YKASNLHT	AALABBBA
B	kappa	Mus.musculus	Mo_IGKV15-103*01	94.2	Mo_IGKV15-103*01	85.7	L3	9	L3-9-cis7-1	6	LQGQSYPRT	BBAABBbBB
B	kappa	Mus.musculus	Mo_IGKV15-103*01	94.2	Mo_IGKV15-103*01	83.3	L4	6	L4-6-1	16	GSGTDF	EBEABB
H	heavy	Mus.musculus	Mo_IGHV7-3*04	91.8	Mo_IGHV7-3*04	84.6	H1	13	H1-13-1	7	AASGFTFSDYYMT	BBBLBBAAABBBB
H	heavy	Mus.musculus	Mo_IGHV7-3*04	91.8	Mo_IGHV7-3*04	75.0	H2	12	H2-12-1	12	LIRNKrnGDTAE	BBBBAAALLBBB
H	heavy	Mus.musculus	Mo_IGHV7-3*04	91.8	Mo_IGHV7-3*04	33.3	H3	11	H3-11-*	-1	VRQGRGYTLDY	BBBBBLLBBAB
H	heavy	Mus.musculus	Mo_IGHV7-3*04	91.8	Mo_IGHV7-3*04	75.0	H4	8	H4-8-1	13	RDYSRSIL	BBAAALBB
L	kappa	Mus.musculus	Mo_IGKV15-103*01	94.2	Mo_IGKV15-103*01	81.8	L1	11	L1-11-1	9	RASQNINIWLS	BBABBAEABBB
L	kappa	Mus.musculus	Mo_IGKV15-103*01	94.2	Mo_IGKV15-103*01	100.0	L2	8	L2-8-*	-1	YKASNLHT	BLLABBBA
L	kappa	Mus.musculus	Mo_IGKV15-103*01	94.2	Mo_IGKV15-103*01	85.7	L3	9	L3-9-cis7-1	8	LQGQSYPRT	BBAABBbBB
L	kappa	Mus.musculus	Mo_IGKV15-103*01	94.2	Mo_IGKV15-103*01	83.3	L4	6	L4-6-1	8	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022