PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 3UX9

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
B	heavy	Homo.sapiens	Hu_IGHV3-23*04	100.0	Hu_IGHV3-23*04	100.0	H1	13	H1-13-1	10	AASGFTFSSYAMS	BBBLBBAAABBBB
B	heavy	Homo.sapiens	Hu_IGHV3-23*04	100.0	Hu_IGHV3-23*04	100.0	H2	10	H2-10-2	17	AISGSGGSTY	BBBAALABBB
B	heavy	Homo.sapiens	Hu_IGHV3-23*04	100.0	Hu_IGHV3-23*04	50.0	H3	12	H3-12-*	-1	ARYIDFGDHMDF	BBBBEALABBAB
B	heavy	Homo.sapiens	Hu_IGHV3-23*04	100.0	Hu_IGHV3-23*04	100.0	H4	8	H4-8-1	11	RDNSKNTL	BBAAALBB
B	lambda	Homo.sapiens	Hu_IGLV1-47*03	93.9	Hu_IGLV1-47*03	92.3	L1	13	L1-13-1	16	SGSSSNIGSNYVS	BBBAAAAAABBBB
B	lambda	Homo.sapiens	Hu_IGLV1-47*03	93.9	Hu_IGLV1-47*03	87.5	L2	8	L2-8-*	-1	YDNNQRPS	BLEABBBA
B	lambda	Homo.sapiens	Hu_IGLV1-47*03	93.9	Hu_IGLV1-47*03	11.1	L3	11	L3-11-1	11	QVRDNNENEWV	BBBBAAALBBB
B	lambda	Homo.sapiens	Hu_IGLV1-47*03	93.9	Hu_IGLV1-47*03	100.0	L4	6	L4-6-2	17	KSGTSA	BBEABB
D	heavy	Homo.sapiens	Hu_IGHV3-23*04	100.0	Hu_IGHV3-23*04	100.0	H1	13	H1-13-1	10	AASGFTFSSYAMS	BBBLBBAAABBBB
D	heavy	Homo.sapiens	Hu_IGHV3-23*04	100.0	Hu_IGHV3-23*04	100.0	H2	10	H2-10-2	17	AISGSGGSTY	BBBAALABBB
D	heavy	Homo.sapiens	Hu_IGHV3-23*04	100.0	Hu_IGHV3-23*04	50.0	H3	12	H3-12-*	-1	ARYIDFGDHMDF	BBBBEALABBAB
D	heavy	Homo.sapiens	Hu_IGHV3-23*04	100.0	Hu_IGHV3-23*04	100.0	H4	8	H4-8-1	11	RDNSKNTL	BBAAALBB
D	lambda	Homo.sapiens	Hu_IGLV1-47*03	93.9	Hu_IGLV1-47*03	92.3	L1	13	L1-13-1	16	SGSSSNIGSNYVS	BBBAAAAAABBBB
D	lambda	Homo.sapiens	Hu_IGLV1-47*03	93.9	Hu_IGLV1-47*03	87.5	L2	8	L2-8-*	-1	YDNNQRPS	BLEABBBB
D	lambda	Homo.sapiens	Hu_IGLV1-47*03	93.9	Hu_IGLV1-47*03	11.1	L3	11	L3-11-1	11	QVRDNNENEWV	BBBBAAALBBB
D	lambda	Homo.sapiens	Hu_IGLV1-47*03	93.9	Hu_IGLV1-47*03	100.0	L4	6	L4-6-2	17	KSGTSA	BBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022