PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 3UMT

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Mus.musculus	Mo_IGHV1S113*01	93.4	Mo_IGHV1S113*01	100.0	H1	13	H1-13-1	7	KTSGYTFTEYTMH	BBBLBBAAABBBB
A	heavy	Mus.musculus	Mo_IGHV1S113*01	93.4	Mo_IGHV1S113*01	100.0	H2	10	H2-10-1	10	GINPNNGGTS	BBBAAALBBB
A	heavy	Mus.musculus	Mo_IGHV1S113*01	93.4	Mo_IGHV1S113*01	0.0	H3	12	H3-12-*	-1	ARDDRYPAWFAY	BBBBBBaBBLAB
A	heavy	Mus.musculus	Mo_IGHV1S113*01	93.4	Mo_IGHV1S113*01	100.0	H4	8	H4-8-1	7	VDKSSSTA	BBAAALBB
A	kappa	Mus.musculus	Mo_IGKV9-120*01	95.7	Mo_IGKV9-120*01	90.9	L1	11	L1-11-1	8	RASQDIGSNLN	BBABBAEABBB
A	kappa	Mus.musculus	Mo_IGKV9-120*01	95.7	Mo_IGKV9-120*01	100.0	L2	8	L2-8-1	5	YATSSLDS	BLEABBBB
A	kappa	Mus.musculus	Mo_IGKV9-120*01	95.7	Mo_IGKV9-120*01	100.0	L3	9	L3-9-cis7-1	8	LQYASSPPT	BBAABBbBB
A	kappa	Mus.musculus	Mo_IGKV9-120*01	95.7	Mo_IGKV9-120*01	100.0	L4	6	L4-6-2	10	RSGSDY	BBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022