PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 3ULS

#CDRs = 8; #Clusters = 10.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	lambda	Homo.sapiens	Hu_IGLV3-21*02	90.9	Hu_IGLV3-21*02	63.6	L1	11	L1-11-4	16	SGDNIGSYYVH	BEAAAAABBBB
A	lambda	Homo.sapiens	Hu_IGLV3-21*02	90.9	Hu_IGLV3-21*02	75.0	L2	8	L2-8-1	13	YEDSERPS	BLEABBBB
A	lambda	Homo.sapiens	Hu_IGLV3-21*02	90.9	Hu_IGLV3-21*02	11.1	L3	10	L3-10-3	18	SSYDDPNFQV	BBBBAAAEBB
A	lambda	Homo.sapiens	Hu_IGLV3-21*02	90.9	Hu_IGLV3-21*02	100.0	L4	6	L4-6-2	19	NSGNTA	BBEABB
B	heavy	Homo.sapiens	Hu_IGHV6-1*01	98.6	Hu_IGHV6-1*01	93.3	H1	15	H1-15-2	15	AISGDSVSSnsAAWG	BBBLBBAABAABBBB
B	heavy	Homo.sapiens	Hu_IGHV6-1*01	98.6	Hu_IGHV6-1*01	54.5	H2	11	H2-11-*	-1	IIQKRSKwYNN	BBBBBABBBBB
B	heavy	Homo.sapiens	Hu_IGHV6-1*01	98.6	Hu_IGHV6-1*01	100.0	H3	12	H3-12-*	-1	ARYSYPFYSIDY	BBBBBaALBBAB
B	heavy	Homo.sapiens	Hu_IGHV6-1*01	98.6	Hu_IGHV6-1*01	100.0	H4	8	H4-8-1	19	PDTSKNQF	BBAAALBB
H	heavy	Homo.sapiens	Hu_IGHV6-1*01	98.6	Hu_IGHV6-1*01	93.3	H1	15	H1-15-2	13	AISGDSVSSnsAAWG	BBBLBBAABAABBBB
H	heavy	Homo.sapiens	Hu_IGHV6-1*01	98.6	Hu_IGHV6-1*01	54.5	H2	11	H2-11-*	-1	IIQKRSKwYNN	BBBBBABBBBB
H	heavy	Homo.sapiens	Hu_IGHV6-1*01	98.6	Hu_IGHV6-1*01	100.0	H3	12	H3-12-*	-1	ARYSYPFYSIDY	BBBBBaALBBAB
H	heavy	Homo.sapiens	Hu_IGHV6-1*01	98.6	Hu_IGHV6-1*01	100.0	H4	8	H4-8-1	23	PDTSKNQF	BBAAALBB
L	lambda	Homo.sapiens	Hu_IGLV3-21*02	90.9	Hu_IGLV3-21*02	63.6	L1	11	L1-11-3	13	SGDNIGSYYVH	BBBLAAABBBB
L	lambda	Homo.sapiens	Hu_IGLV3-21*02	90.9	Hu_IGLV3-21*02	75.0	L2	8	L2-8-1	7	YEDSERPS	BLEABBBB
L	lambda	Homo.sapiens	Hu_IGLV3-21*02	90.9	Hu_IGLV3-21*02	11.1	L3	10	L3-10-*	-1	SSYDDPNFQV	BBBBBaBABB
L	lambda	Homo.sapiens	Hu_IGLV3-21*02	90.9	Hu_IGLV3-21*02	100.0	L4	6	L4-6-2	14	NSGNTA	BBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022