PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 3UJJ

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Homo.sapiens	Hu_IGHV5-51*01	98.6	Hu_IGHV5-51*01	76.9	H1	13	H1-13-1	7	KASGYSFSSYWIA	BBBLBBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV5-51*01	98.6	Hu_IGHV5-51*01	80.0	H2	10	H2-10-1	12	FIYPADSDTR	BBBAAALBBB
H	heavy	Homo.sapiens	Hu_IGHV5-51*01	98.6	Hu_IGHV5-51*01	50.0	H3	17	H3-17-*	-1	AILGFwgaNRGGGGMDV
H	heavy	Homo.sapiens	Hu_IGHV5-51*01	98.6	Hu_IGHV5-51*01	100.0	H4	8	H4-8-1	10	ADKSISTA	BBAAALBB
L	lambda	Homo.sapiens	Hu_IGLV3-10*01	95.5	Hu_IGLV3-10*01	90.9	L1	11	L1-11-4	10	SGDALPEKYAY	BBAAAAABBBB
L	lambda	Homo.sapiens	Hu_IGLV3-10*01	95.5	Hu_IGLV3-10*01	100.0	L2	8	L2-8-1	5	YEDSKRPS	BLLABBBB
L	lambda	Homo.sapiens	Hu_IGLV3-10*01	95.5	Hu_IGLV3-10*01	55.6	L3	11	L3-11-2	11	YSTNSGGTFFV	BBBBAALABBB
L	lambda	Homo.sapiens	Hu_IGLV3-10*01	95.5	Hu_IGLV3-10*01	83.3	L4	6	L4-6-2	7	RSGTMA	BBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022