PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 3UBX

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
G	heavy	Mus.musculus	Mo_IGHV9-1*02	94.5	Mo_IGHV9-1*02	84.6	H1	13	H1-13-1	14	KASGYSFTNYGMH	BBBLBBAAABBBB
G	heavy	Mus.musculus	Mo_IGHV9-1*02	94.5	Mo_IGHV9-1*02	100.0	H2	10	H2-10-1	16	WINTYTGEPT	BBBAAALBBB
G	heavy	Mus.musculus	Mo_IGHV9-1*02	94.5	Mo_IGHV9-1*02	50.0	H3	13	H3-13-*	-1	ASAAGIRWAWFAW	BBBBEAAABBBAB
G	heavy	Mus.musculus	Mo_IGHV9-1*02	94.5	Mo_IGHV9-1*02	100.0	H4	8	H4-8-1	13	LETSASTA	BBAAALBB
H	heavy	Mus.musculus	Mo_IGHV9-1*02	94.5	Mo_IGHV9-1*02	84.6	H1	13	H1-13-1	14	KASGYSFTNYGMH	BBBLBBAAABBBB
H	heavy	Mus.musculus	Mo_IGHV9-1*02	94.5	Mo_IGHV9-1*02	100.0	H2	10	H2-10-1	16	WINTYTGEPT	BBBAAALBBB
H	heavy	Mus.musculus	Mo_IGHV9-1*02	94.5	Mo_IGHV9-1*02	50.0	H3	13	H3-13-*	-1	ASAAGIRWAWFAW	BBBBEAAABBBAB
H	heavy	Mus.musculus	Mo_IGHV9-1*02	94.5	Mo_IGHV9-1*02	100.0	H4	8	H4-8-1	13	LETSASTA	BBAAALBB
I	kappa	Mus.musculus	Mo_IGKV13-84*01	97.1	Mo_IGKV13-84*01	90.9	L1	11	L1-11-2	10	KASEDIYNRIA	BBABBALLBBB
I	kappa	Mus.musculus	Mo_IGKV13-84*01	97.1	Mo_IGKV13-84*01	100.0	L2	8	L2-8-*	-1	SGATSLET	BLLABBBA
I	kappa	Mus.musculus	Mo_IGKV13-84*01	97.1	Mo_IGKV13-84*01	71.4	L3	9	L3-9-cis7-1	9	QHYWSSPLT	BBAABBbBB
I	kappa	Mus.musculus	Mo_IGKV13-84*01	97.1	Mo_IGKV13-84*01	100.0	L4	6	L4-6-1	10	GSGKDY	EBEABB
L	kappa	Mus.musculus	Mo_IGKV13-84*01	97.1	Mo_IGKV13-84*01	90.9	L1	11	L1-11-2	9	KASEDIYNRIA	BBABBALLBBB
L	kappa	Mus.musculus	Mo_IGKV13-84*01	97.1	Mo_IGKV13-84*01	100.0	L2	8	L2-8-*	-1	SGATSLET	BLLABBBA
L	kappa	Mus.musculus	Mo_IGKV13-84*01	97.1	Mo_IGKV13-84*01	71.4	L3	9	L3-9-cis7-1	9	QHYWSSPLT	BBAABBbBB
L	kappa	Mus.musculus	Mo_IGKV13-84*01	97.1	Mo_IGKV13-84*01	100.0	L4	6	L4-6-1	10	GSGKDY	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022