PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 3U9U

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Mus.musculus	Mo_IGHV8-8*01	94.5	Mo_IGHV8-8*01	86.7	H1	15	H1-15-1	12	SFSGFSLSTYGIgvG	BBBLBBAABBLBBBB
A	heavy	Mus.musculus	Mo_IGHV8-8*01	94.5	Mo_IGHV8-8*01	77.8	H2	9	H2-9-1	14	HIWWNDNKY	BBBAALBBB
A	heavy	Mus.musculus	Mo_IGHV8-8*01	94.5	Mo_IGHV8-8*01	100.0	H3	11	H3-11-*	-1	ARIPDDHYFDY	BBBBEBBEBAB
A	heavy	Mus.musculus	Mo_IGHV8-8*01	94.5	Mo_IGHV8-8*01	87.5	H4	8	H4-8-1	17	KDTSNNQV	BBAAALBB
B	kappa	Mus.musculus	Mo_IGKV1-117*01	100.0	Mo_IGKV1-117*01	100.0	L1	16	L1-16-1	14	RSSQSIvhsngNTYLE	BBABBABBAALBBBBB
B	kappa	Mus.musculus	Mo_IGKV1-117*01	100.0	Mo_IGKV1-117*01	100.0	L2	8	L2-8-1	11	YKVSNRFS	BLLABBBB
B	kappa	Mus.musculus	Mo_IGKV1-117*01	100.0	Mo_IGKV1-117*01	100.0	L3	9	L3-9-cis7-1	13	FQGSHVPWT	BBAABBbBB
B	kappa	Mus.musculus	Mo_IGKV1-117*01	100.0	Mo_IGKV1-117*01	100.0	L4	6	L4-6-1	21	GSGTDF	EBEABB
C	heavy	Mus.musculus	Mo_IGHV8-8*01	94.5	Mo_IGHV8-8*01	86.7	H1	15	H1-15-1	8	SFSGFSLSTYGIgvG	BBBLBBAABBLBBBB
C	heavy	Mus.musculus	Mo_IGHV8-8*01	94.5	Mo_IGHV8-8*01	77.8	H2	9	H2-9-1	15	HIWWNDNKY	BBBAALBBB
C	heavy	Mus.musculus	Mo_IGHV8-8*01	94.5	Mo_IGHV8-8*01	100.0	H3	11	H3-11-*	-1	ARIPDDHYFDY	BBBBEBBEBAB
C	heavy	Mus.musculus	Mo_IGHV8-8*01	94.5	Mo_IGHV8-8*01	87.5	H4	8	H4-8-1	14	KDTSNNQV	BBAAALBB
D	kappa	Mus.musculus	Mo_IGKV1-117*01	100.0	Mo_IGKV1-117*01	100.0	L1	16	L1-16-1	12	RSSQSIvhsngNTYLE	BBABBABBAALBBBBB
D	kappa	Mus.musculus	Mo_IGKV1-117*01	100.0	Mo_IGKV1-117*01	100.0	L2	8	L2-8-1	13	YKVSNRFS	BLLABBBB
D	kappa	Mus.musculus	Mo_IGKV1-117*01	100.0	Mo_IGKV1-117*01	100.0	L3	9	L3-9-cis7-1	12	FQGSHVPWT	BBAABBbBB
D	kappa	Mus.musculus	Mo_IGKV1-117*01	100.0	Mo_IGKV1-117*01	100.0	L4	6	L4-6-1	21	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022