PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 3U7Y

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Homo.sapiens	Hu_IGHV1-24*01	65.8	None	-1.0	H1	13	H1-13-1	12	RASGYEFLNCPIN	BBBLBBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV1-24*01	65.8	None	-1.0	H2	10	H2-10-6	11	WLKPRGGAVN	BBBABLLBBB
H	heavy	Homo.sapiens	Hu_IGHV1-24*01	65.8	Hu_IGHV1-24*01	0.0	H3	18	H3-18-*	-1	TRGKYCtardYYNWDFEH
H	heavy	Homo.sapiens	Hu_IGHV1-24*01	65.8	Hu_IGHV1-24*01	50.0	H4	8	H4-8-1	10	RDVYSDTA	BBAAALBB
L	kappa	Homo.sapiens	Hu_IGKV3D-20*02	78.3	CDRLenMismatch	-1.0	L1	9	L1-9-*	-1	RTSQSGSLA
L	kappa	Homo.sapiens	Hu_IGKV3D-20*02	78.3	Hu_IGKV3D-20*02	50.0	L2	8	L2-8-1	14	YSGSTRAA	BLLABBBB
L	kappa	Homo.sapiens	Hu_IGKV3D-20*02	78.3	Hu_IGKV3D-20*02	0.0	L3	5	L3-5-1	7	QQYEF	BBEAB
L	kappa	Homo.sapiens	Hu_IGKV3D-20*02	78.3	Hu_IGKV3D-20*02	33.3	L4	6	L4-6-2	16	RWGADY	BBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022