PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 3U79

#CDRs = 4; #Clusters = 5.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	kappa	Homo.sapiens	Hu_IGKV1-33*01	100.0	Hu_IGKV1-33*01	81.8	L1	11	L1-11-1	7	QASQDISNFLI	BBABBAEABBB
A	kappa	Homo.sapiens	Hu_IGKV1-33*01	100.0	Hu_IGKV1-33*01	100.0	L2	8	L2-8-1	6	YDASNLET	BLLABBBB
A	kappa	Homo.sapiens	Hu_IGKV1-33*01	100.0	Hu_IGKV1-33*01	85.7	L3	10	L3-10-cis78-*	-1	QQYHNlpPFT	BBAAABBbBB
A	kappa	Homo.sapiens	Hu_IGKV1-33*01	100.0	Hu_IGKV1-33*01	100.0	L4	6	L4-6-1	11	GSGTDF	EBEABB
B	kappa	Homo.sapiens	Hu_IGKV1-33*01	100.0	Hu_IGKV1-33*01	81.8	L1	11	L1-11-1	5	QASQDISNFLI	BBABBAEABBB
B	kappa	Homo.sapiens	Hu_IGKV1-33*01	100.0	Hu_IGKV1-33*01	100.0	L2	8	L2-8-1	6	YDASNLET	BLLABBBB
B	kappa	Homo.sapiens	Hu_IGKV1-33*01	100.0	Hu_IGKV1-33*01	85.7	L3	10	L3-10-cis78-*	-1	QQYHNlpPFT	BBBAABBbBB
B	kappa	Homo.sapiens	Hu_IGKV1-33*01	100.0	Hu_IGKV1-33*01	100.0	L4	6	L4-6-1	12	GSGTDF	EBEABB
C	kappa	Homo.sapiens	Hu_IGKV1-33*01	100.0	Hu_IGKV1-33*01	81.8	L1	11	L1-11-1	6	QASQDISNFLI	BBABBAEABBB
C	kappa	Homo.sapiens	Hu_IGKV1-33*01	100.0	Hu_IGKV1-33*01	100.0	L2	8	L2-8-1	8	YDASNLET	BLLABBBB
C	kappa	Homo.sapiens	Hu_IGKV1-33*01	100.0	Hu_IGKV1-33*01	85.7	L3	10	L3-10-*	-1	QQYHNlpPFT	BBBAABBbBB
C	kappa	Homo.sapiens	Hu_IGKV1-33*01	100.0	Hu_IGKV1-33*01	100.0	L4	6	L4-6-1	12	GSGTDF	EBEABB
D	kappa	Homo.sapiens	Hu_IGKV1-33*01	100.0	Hu_IGKV1-33*01	81.8	L1	11	L1-11-1	5	QASQDISNFLI	BBABBAEABBB
D	kappa	Homo.sapiens	Hu_IGKV1-33*01	100.0	Hu_IGKV1-33*01	100.0	L2	8	L2-8-1	9	YDASNLET	BLLABBBB
D	kappa	Homo.sapiens	Hu_IGKV1-33*01	100.0	Hu_IGKV1-33*01	85.7	L3	10	L3-10-cis78-*	-1	QQYHNlpPFT	BBAAABBbBB
D	kappa	Homo.sapiens	Hu_IGKV1-33*01	100.0	Hu_IGKV1-33*01	100.0	L4	6	L4-6-1	17	GSGTDF	EBEABB
E	kappa	Homo.sapiens	Hu_IGKV1-33*01	100.0	Hu_IGKV1-33*01	81.8	L1	11	L1-11-1	5	QASQDISNFLI	BBABBAEABBB
E	kappa	Homo.sapiens	Hu_IGKV1-33*01	100.0	Hu_IGKV1-33*01	100.0	L2	8	L2-8-1	5	YDASNLET	BLLABBBB
E	kappa	Homo.sapiens	Hu_IGKV1-33*01	100.0	Hu_IGKV1-33*01	85.7	L3	10	L3-10-cis78-*	-1	QQYHNlpPFT	BBAAABBbBB
E	kappa	Homo.sapiens	Hu_IGKV1-33*01	100.0	Hu_IGKV1-33*01	100.0	L4	6	L4-6-1	17	GSGTDF	EBEABB
F	kappa	Homo.sapiens	Hu_IGKV1-33*01	100.0	Hu_IGKV1-33*01	81.8	L1	11	L1-11-1	5	QASQDISNFLI	BBABBAEABBB
F	kappa	Homo.sapiens	Hu_IGKV1-33*01	100.0	Hu_IGKV1-33*01	100.0	L2	8	L2-8-1	8	YDASNLET	BLLABBBB
F	kappa	Homo.sapiens	Hu_IGKV1-33*01	100.0	Hu_IGKV1-33*01	85.7	L3	10	L3-10-cis78-*	-1	QQYHNlpPFT	BBBAABBbBB
F	kappa	Homo.sapiens	Hu_IGKV1-33*01	100.0	Hu_IGKV1-33*01	100.0	L4	6	L4-6-1	8	GSGTDF	EBEABB
G	kappa	Homo.sapiens	Hu_IGKV1-33*01	100.0	Hu_IGKV1-33*01	81.8	L1	11	L1-11-1	5	QASQDISNFLI	BBABBAEABBB
G	kappa	Homo.sapiens	Hu_IGKV1-33*01	100.0	Hu_IGKV1-33*01	100.0	L2	8	L2-8-1	9	YDASNLET	BLLABBBB
G	kappa	Homo.sapiens	Hu_IGKV1-33*01	100.0	Hu_IGKV1-33*01	85.7	L3	10	L3-10-cis78-*	-1	QQYHNlpPFT	BBAAABBbBB
G	kappa	Homo.sapiens	Hu_IGKV1-33*01	100.0	Hu_IGKV1-33*01	100.0	L4	6	L4-6-1	5	GSGTDF	EBEABB
H	kappa	Homo.sapiens	Hu_IGKV1-33*01	100.0	Hu_IGKV1-33*01	81.8	L1	11	L1-11-1	6	QASQDISNFLI	BBABBAEABBB
H	kappa	Homo.sapiens	Hu_IGKV1-33*01	100.0	Hu_IGKV1-33*01	100.0	L2	8	L2-8-1	4	YDASNLET	BLLABBBB
H	kappa	Homo.sapiens	Hu_IGKV1-33*01	100.0	Hu_IGKV1-33*01	85.7	L3	10	L3-10-cis78-*	-1	QQYHNlpPFT	BBAAABBbBB
H	kappa	Homo.sapiens	Hu_IGKV1-33*01	100.0	Hu_IGKV1-33*01	100.0	L4	6	L4-6-1	12	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022