PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 3U46

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Homo.sapiens	Hu_IGHV3-20*04	86.3	Hu_IGHV3-20*04	38.5	H1	13	H1-13-1	14	KGSGFIFENFGFG	BBBLBBAAABBBB
A	heavy	Homo.sapiens	Hu_IGHV3-20*04	86.3	Hu_IGHV3-20*04	60.0	H2	10	H2-10-2	14	GTNWNGGDSR	BBBAALABBB
A	heavy	Homo.sapiens	Hu_IGHV3-20*04	86.3	Hu_IGHV3-20*04	100.0	H3	26	H3-26-*	-1	ARGTDYTiddqgiryqgsgTFWYFDV
A	heavy	Homo.sapiens	Hu_IGHV3-20*04	86.3	Hu_IGHV3-20*04	50.0	H4	8	H4-8-1	18	RDNSNNFV	BBAAALBB
B	kappa	Homo.sapiens	Hu_IGKV3D-20*02	85.5	Hu_IGKV3D-20*02	58.3	L1	12	L1-12-1	15	RASQNVHpRYFA	BBABBBBAABBB
B	kappa	Homo.sapiens	Hu_IGKV3D-20*02	85.5	Hu_IGKV3D-20*02	37.5	L2	8	L2-8-1	18	HSGSTRAA	BLEABBBB
B	kappa	Homo.sapiens	Hu_IGKV3D-20*02	85.5	Hu_IGKV3D-20*02	28.6	L3	9	L3-9-cis7-1	10	QQYGGSPYT	BBAABBbBB
B	kappa	Homo.sapiens	Hu_IGKV3D-20*02	85.5	Hu_IGKV3D-20*02	66.7	L4	6	L4-6-1	6	GSGMHF	EBEABB
H	heavy	Homo.sapiens	Hu_IGHV3-20*04	86.3	Hu_IGHV3-20*04	38.5	H1	13	H1-13-1	15	KGSGFIFENFGFG	BBBLBBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV3-20*04	86.3	Hu_IGHV3-20*04	60.0	H2	10	H2-10-2	14	GTNWNGGDSR	BBBAALABBB
H	heavy	Homo.sapiens	Hu_IGHV3-20*04	86.3	Hu_IGHV3-20*04	100.0	H3	26	H3-26-*	-1	ARGTDYTiddqgiryqgsgTFWYFDV
H	heavy	Homo.sapiens	Hu_IGHV3-20*04	86.3	Hu_IGHV3-20*04	50.0	H4	8	H4-8-1	18	RDNSNNFV	BBAAALBB
L	kappa	Homo.sapiens	Hu_IGKV3D-20*02	85.5	Hu_IGKV3D-20*02	58.3	L1	12	L1-12-1	16	RASQNVHpRYFA	BBABBBBAABBB
L	kappa	Homo.sapiens	Hu_IGKV3D-20*02	85.5	Hu_IGKV3D-20*02	37.5	L2	8	L2-8-1	16	HSGSTRAA	BLEABBBB
L	kappa	Homo.sapiens	Hu_IGKV3D-20*02	85.5	Hu_IGKV3D-20*02	28.6	L3	9	L3-9-cis7-1	9	QQYGGSPYT	BBAABBbBB
L	kappa	Homo.sapiens	Hu_IGKV3D-20*02	85.5	Hu_IGKV3D-20*02	66.7	L4	6	L4-6-1	6	GSGMHF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022