PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 3TT3

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Mus.musculus	Mo_IGHV1S126*01	86.3	Mo_IGHV1S126*01	61.5	H1	13	H1-13-1	11	KAFGYTFTNHHIN	BBBLBBAAABBBB
H	heavy	Mus.musculus	Mo_IGHV1S126*01	86.3	Mo_IGHV1S126*01	40.0	H2	10	H2-10-*	-1	YIIPYNDYTT	BBBAAAELBB
H	heavy	Mus.musculus	Mo_IGHV1S126*01	86.3	Mo_IGHV1S126*01	100.0	H3	12	H3-12-*	-1	ARGNYGsAWFAY
H	heavy	Mus.musculus	Mo_IGHV1S126*01	86.3	Mo_IGHV1S126*01	87.5	H4	8	H4-8-1	6	VDRSSSTA	BBAAALBB
L	kappa	Mus.musculus	Mo_IGKV3-5*01	95.7	Mo_IGKV3-5*01	80.0	L1	15	L1-15-1	18	RASESVDTYdnsfIH	BBABBABBLLBBABB
L	kappa	Mus.musculus	Mo_IGKV3-5*01	95.7	Mo_IGKV3-5*01	100.0	L2	8	L2-8-1	13	YRASNLES	BLLABBBB
L	kappa	Mus.musculus	Mo_IGKV3-5*01	95.7	Mo_IGKV3-5*01	100.0	L3	9	L3-9-cis7-1	20	QQSNEDPLT	BBAABBbBB
L	kappa	Mus.musculus	Mo_IGKV3-5*01	95.7	Mo_IGKV3-5*01	100.0	L4	6	L4-6-1	24	GSRTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022