PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 3TT1

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Mus.musculus	Mo_IGHV1-81*01	91.8	Mo_IGHV1-81*01	76.9	H1	13	H1-13-1	10	KASGYTFTDYYIN	BBBLBBAAABBBB
H	heavy	Mus.musculus	Mo_IGHV1-81*01	91.8	Mo_IGHV1-81*01	70.0	H2	10	H2-10-1	12	EIYPGVGTTY	BBBAAALBBB
H	heavy	Mus.musculus	Mo_IGHV1-81*01	91.8	Mo_IGHV1-81*01	100.0	H3	14	H3-14-*	-1	ARRTVTMGRYAMDY	BBBBABBbBBBBAB
H	heavy	Mus.musculus	Mo_IGHV1-81*01	91.8	Mo_IGHV1-81*01	75.0	H4	8	H4-8-1	12	ADKSSRSA	BBAAALBB
I	heavy	Mus.musculus	Mo_IGHV1-81*01	91.8	Mo_IGHV1-81*01	76.9	H1	13	H1-13-1	10	KASGYTFTDYYIN	BBBLBBAAABBBB
I	heavy	Mus.musculus	Mo_IGHV1-81*01	91.8	Mo_IGHV1-81*01	70.0	H2	10	H2-10-1	12	EIYPGVGTTY	BBBAAALBBB
I	heavy	Mus.musculus	Mo_IGHV1-81*01	91.8	Mo_IGHV1-81*01	100.0	H3	14	H3-14-*	-1	ARRTVTMGRYAMDY	BBBBABBbBBBBAB
I	heavy	Mus.musculus	Mo_IGHV1-81*01	91.8	Mo_IGHV1-81*01	75.0	H4	8	H4-8-1	12	ADKSSRSA	BBAAALBB
L	kappa	Mus.musculus	Mo_IGKV3-4*01	100.0	Mo_IGKV3-4*01	100.0	L1	15	L1-15-1	8	KASQSVDydgdSYMN	BBABBABBLLBBBBB
L	kappa	Mus.musculus	Mo_IGKV3-4*01	100.0	Mo_IGKV3-4*01	87.5	L2	8	L2-8-1	8	YGASNLES	BLLABBBB
L	kappa	Mus.musculus	Mo_IGKV3-4*01	100.0	Mo_IGKV3-4*01	100.0	L3	9	L3-9-cis7-1	7	QQSNEDPYT	BBAABBbBB
L	kappa	Mus.musculus	Mo_IGKV3-4*01	100.0	Mo_IGKV3-4*01	100.0	L4	6	L4-6-1	8	GSGTDF	EBEABB
M	kappa	Mus.musculus	Mo_IGKV3-4*01	100.0	Mo_IGKV3-4*01	100.0	L1	15	L1-15-1	8	KASQSVDydgdSYMN	BBABBABBLLBBBBB
M	kappa	Mus.musculus	Mo_IGKV3-4*01	100.0	Mo_IGKV3-4*01	87.5	L2	8	L2-8-1	8	YGASNLES	BLLABBBB
M	kappa	Mus.musculus	Mo_IGKV3-4*01	100.0	Mo_IGKV3-4*01	100.0	L3	9	L3-9-cis7-1	6	QQSNEDPYT	BBAABBbBB
M	kappa	Mus.musculus	Mo_IGKV3-4*01	100.0	Mo_IGKV3-4*01	100.0	L4	6	L4-6-1	8	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022