PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 3TJE

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Homo.sapiens	Hu_IGHV4-39*01	87.7	Hu_IGHV4-39*01	66.7	H1	15	H1-15-*	-1	TVSGASISanSYYGV	BBBLBBAAABBBBBB
H	heavy	Homo.sapiens	Hu_IGHV4-39*01	87.7	None	-1.0	H2	14	H2-14-*	-1	SIayrgNSNSGSTY
H	heavy	Homo.sapiens	Hu_IGHV4-39*01	87.7	Hu_IGHV4-39*01	100.0	H3	19	H3-19-*	-1	ARRQllddgTGYQWAAFDV
H	heavy	Homo.sapiens	Hu_IGHV4-39*01	87.7	Hu_IGHV4-39*01	87.5	H4	8	H4-8-1	7	VDTSKNQV	BBAAALBB
L	lambda	Homo.sapiens	Hu_IGLV1-36*01	94.1	Hu_IGLV1-36*01	61.5	L1	13	L1-13-1	10	SGNSFNIGRYPVN	BBBAAAAAABBBB
L	lambda	Homo.sapiens	Hu_IGLV1-36*01	94.1	Hu_IGLV1-36*01	50.0	L2	8	L2-8-1	4	YYNNLRFS	BLEABBBB
L	lambda	Homo.sapiens	Hu_IGLV1-36*01	94.1	Hu_IGLV1-36*01	55.6	L3	11	L3-11-1	10	STWDDTLKGWV	BBBBAAALBBB
L	lambda	Homo.sapiens	Hu_IGLV1-36*01	94.1	Hu_IGLV1-36*01	100.0	L4	6	L4-6-2	9	KSGTSA	BBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022