PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 3T2N

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Homo.sapiens	Hu_IGHV7-4-1*02	95.9	Mo_IGHV9-2-1*01	92.3	H1	13	H1-13-1	9	KASGYTFTDYSMR	BBBLBBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV7-4-1*02	95.9	Mo_IGHV9-2-1*01	90.0	H2	10	H2-10-1	17	WINTETGSPT	BBBAAALBBB
H	heavy	Homo.sapiens	Hu_IGHV7-4-1*02	95.9	Hu_IGHV7-4-1*02	100.0	H3	6	H3-6-1	12	ARGFAY	BBEAAB
H	heavy	Homo.sapiens	Hu_IGHV7-4-1*02	95.9	Hu_IGHV7-4-1*02	100.0	H4	8	H4-8-1	9	LDTSVSTA	BBAAALBB
I	heavy	Homo.sapiens	Hu_IGHV7-4-1*02	95.9	Mo_IGHV9-2-1*01	92.3	H1	13	H1-13-1	9	KASGYTFTDYSMR	BBBLBBAAABBBB
I	heavy	Homo.sapiens	Hu_IGHV7-4-1*02	95.9	Mo_IGHV9-2-1*01	90.0	H2	10	H2-10-1	16	WINTETGSPT	BBBAAALBBB
I	heavy	Homo.sapiens	Hu_IGHV7-4-1*02	95.9	Hu_IGHV7-4-1*02	100.0	H3	6	H3-6-1	12	ARGFAY	BBEAAB
I	heavy	Homo.sapiens	Hu_IGHV7-4-1*02	95.9	Hu_IGHV7-4-1*02	100.0	H4	8	H4-8-1	8	LDTSVSTA	BBAAALBB
L	lambda	Homo.sapiens	Hu_IGLV7-43*01	95.6	Mo_IGLV1*01	100.0	L1	14	L1-14-1	6	RSSTGAVTtSNYAN	BBAAEBBBAAALBB
L	lambda	Homo.sapiens	Hu_IGLV7-43*01	95.6	Mo_IGLV1*01	87.5	L2	8	L2-8-*	-1	GDTNNRAP	BLEABBBA
L	lambda	Homo.sapiens	Hu_IGLV7-43*01	95.6	Hu_IGLV7-43*01	25.0	L3	9	L3-9-4	7	ALWYSNHFI	BBBBEABBB
L	lambda	Homo.sapiens	Hu_IGLV7-43*01	95.6	Hu_IGLV7-43*01	100.0	L4	6	L4-6-*	-1	LLGGKA	BBLLBB
M	lambda	Homo.sapiens	Hu_IGLV7-43*01	95.6	Mo_IGLV1*01	100.0	L1	14	L1-14-1	6	RSSTGAVTtSNYAN	BBAAEBBBAAALBB
M	lambda	Homo.sapiens	Hu_IGLV7-43*01	95.6	Mo_IGLV1*01	87.5	L2	8	L2-8-*	-1	GDTNNRAP	BLEABBBA
M	lambda	Homo.sapiens	Hu_IGLV7-43*01	95.6	Hu_IGLV7-43*01	25.0	L3	9	L3-9-4	8	ALWYSNHFI	BBBBEABBB
M	lambda	Homo.sapiens	Hu_IGLV7-43*01	95.6	Hu_IGLV7-43*01	100.0	L4	6	L4-6-*	-1	LLGGKA	BBLLBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022