PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 3SQO

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Homo.sapiens	Hu_IGHV1-46*01	94.5	Hu_IGHV1-46*01	100.0	H1	13	H1-13-1	15	KASGYTFTSYYMH	BBBLBBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV1-46*01	94.5	Hu_IGHV1-46*01	50.0	H2	10	H2-10-6	13	EISPFGGRTN	BBBABLLBBB
H	heavy	Homo.sapiens	Hu_IGHV1-46*01	94.5	Hu_IGHV1-46*01	100.0	H3	11	H3-11-*	-1	ARERPLYASDL	BBBBAABBLAB
H	heavy	Homo.sapiens	Hu_IGHV1-46*01	94.5	Hu_IGHV1-46*01	100.0	H4	8	H4-8-1	14	RDTSTSTV	BBAAALBB
L	kappa	Homo.sapiens	Hu_IGKV1D-13*01	95.6	Hu_IGKV1D-13*01	100.0	L1	11	L1-11-1	9	RASQGISSALA	BBABBAEABBB
L	kappa	Homo.sapiens	Hu_IGKV1D-13*01	95.6	Hu_IGKV1D-13*01	37.5	L2	8	L2-8-1	10	YSASYRYT	BLLABBBB
L	kappa	Homo.sapiens	Hu_IGKV1D-13*01	95.6	Hu_IGKV1D-13*01	28.6	L3	9	L3-9-2	15	QQRYSLWRT	BBAABABBB
L	kappa	Homo.sapiens	Hu_IGKV1D-13*01	95.6	Hu_IGKV1D-13*01	100.0	L4	6	L4-6-1	11	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022