PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 3SO3

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
B	kappa	Homo.sapiens	Hu_IGKV3-20*02	95.7	Hu_IGKV3-20*02	100.0	L1	12	L1-12-1	8	RASQSVSsSYLA	BBABBBBAAABB
B	kappa	Homo.sapiens	Hu_IGKV3-20*02	95.7	Hu_IGKV3-20*02	87.5	L2	8	L2-8-1	7	YGASTRAT	BLLABBBB
B	kappa	Homo.sapiens	Hu_IGKV3-20*02	95.7	Hu_IGKV3-20*02	100.0	L3	11	L3-11-*	-1	QQRSNWPpgYT	BBBBABbBEBB
B	kappa	Homo.sapiens	Hu_IGKV3-20*02	95.7	Hu_IGKV3-20*02	100.0	L4	6	L4-6-1	5	GSGTDF	EBEABB
C	heavy	Homo.sapiens	Hu_IGHV3-23*04	95.9	Hu_IGHV3-23*04	100.0	H1	13	H1-13-1	8	AASGFTFSSYAMS	BBBLBBAAABBBB
C	heavy	Homo.sapiens	Hu_IGHV3-23*04	95.9	Hu_IGHV3-23*04	100.0	H2	10	H2-10-2	8	AISGSGGSTY	BBBAALABBB
C	heavy	Homo.sapiens	Hu_IGHV3-23*04	95.9	Hu_IGHV3-23*04	50.0	H3	18	H3-18-*	-1	VKDLGiaarRFVSGAFDI
C	heavy	Homo.sapiens	Hu_IGHV3-23*04	95.9	Hu_IGHV3-23*04	100.0	H4	8	H4-8-1	4	RDNSKNTL	BBAAALBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022