PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 3S96

#CDRs = 8; #Clusters = 9.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Mus.musculus	Hu_IGHV7-4-1*02	74.0	Hu_IGHV7-4-1*02	76.9	H1	13	H1-13-1	9	KASGYTFTTYGMS	BBBLBBAAABBBB
A	heavy	Mus.musculus	Hu_IGHV7-4-1*02	74.0	Hu_IGHV7-4-1*02	70.0	H2	10	H2-10-1	14	WINTYSGVPT	BBBAAALBBB
A	heavy	Mus.musculus	Hu_IGHV7-4-1*02	74.0	Hu_IGHV7-4-1*02	100.0	H3	12	H3-12-*	-1	ARGGDNYLWFAY	BBBBBLLBABAB
A	heavy	Mus.musculus	Hu_IGHV7-4-1*02	74.0	Hu_IGHV7-4-1*02	75.0	H4	8	H4-8-1	5	LETSASTA	BBAAALBB
B	lambda	Mus.musculus	Hu_IGLV4-69*01	77.9	Hu_IGLV4-69*01	58.3	L1	12	L1-12-*	-1	TLNSQHSTYTIE	BBBAAAAABBBB
B	lambda	Mus.musculus	Hu_IGLV4-69*01	77.9	Hu_IGLV4-69*01	66.7	L2	12	L2-12-*	-1	ELKKdgshSTGD	BBBAALBBBBEe
B	lambda	Mus.musculus	Hu_IGLV4-69*01	77.9	Hu_IGLV4-69*01	14.3	L3	13	L3-13-*	-1	GVGDTIKEQfvYV	BBBBBBLLBBBBB
B	lambda	Mus.musculus	Hu_IGLV4-69*01	77.9	Hu_IGLV4-69*01	83.3	L4	6	L4-6-2	16	SSGADR	BBEABB
C	heavy	Mus.musculus	Hu_IGHV7-4-1*02	74.0	Hu_IGHV7-4-1*02	76.9	H1	13	H1-13-1	9	KASGYTFTTYGMS	BBBLBBAAABBBB
C	heavy	Mus.musculus	Hu_IGHV7-4-1*02	74.0	Hu_IGHV7-4-1*02	70.0	H2	10	H2-10-1	16	WINTYSGVPT	BBBAAALBBB
C	heavy	Mus.musculus	Hu_IGHV7-4-1*02	74.0	Hu_IGHV7-4-1*02	100.0	H3	12	H3-12-*	-1	ARGGDNYLWFAY	BBBBBLLBABAB
C	heavy	Mus.musculus	Hu_IGHV7-4-1*02	74.0	Hu_IGHV7-4-1*02	75.0	H4	8	H4-8-1	5	LETSASTA	BBAAALBB
D	lambda	Mus.musculus	Hu_IGLV4-69*01	77.9	Hu_IGLV4-69*01	58.3	L1	12	L1-12-*	-1	TLNSQHSTYTIE	BBBAAAAABBBB
D	lambda	Mus.musculus	Hu_IGLV4-69*01	77.9	Hu_IGLV4-69*01	66.7	L2	12	L2-12-2	8	ELKKdgshSTGD	BBBAALBBBBBB
D	lambda	Mus.musculus	Hu_IGLV4-69*01	77.9	Hu_IGLV4-69*01	14.3	L3	13	L3-13-*	-1	GVGDTIKEQfvYV	BBBBBBLLBBBBB
D	lambda	Mus.musculus	Hu_IGLV4-69*01	77.9	Hu_IGLV4-69*01	83.3	L4	6	L4-6-2	15	SSGADR	BBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022