PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 3RAJ

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Mus.musculus	Mo_IGHV2-5-1*01	97.2	Mo_IGHV2-5-1*01	92.3	H1	13	H1-13-1	23	TVSGFSLISYGVH	BBBLEBAAABBBB
H	heavy	Mus.musculus	Mo_IGHV2-5-1*01	97.2	Mo_IGHV2-5-1*01	100.0	H2	9	H2-9-1	24	VIWRGGSTD	BBBAALBBB
H	heavy	Mus.musculus	Mo_IGHV2-5-1*01	97.2	Mo_IGHV2-5-1*01	100.0	H3	13	H3-13-*	-1	AKTLITTGYAMDY	BBBBEABBABBAB
H	heavy	Mus.musculus	Mo_IGHV2-5-1*01	97.2	Mo_IGHV2-5-1*01	100.0	H4	8	H4-8-1	9	KDNSKSQV	BBAAALBB
L	kappa	Mus.musculus	Mo_IGKV13-84*01	100.0	Mo_IGKV13-84*01	100.0	L1	11	L1-11-2	14	KASEDIYNRLA	BBABBALLBBB
L	kappa	Mus.musculus	Mo_IGKV13-84*01	100.0	Mo_IGKV13-84*01	100.0	L2	8	L2-8-*	-1	SGATSLET	BLLABBEB
L	kappa	Mus.musculus	Mo_IGKV13-84*01	100.0	Mo_IGKV13-84*01	100.0	L3	8	L3-8-3	10	QQYWSTPT	BBAABBBB
L	kappa	Mus.musculus	Mo_IGKV13-84*01	100.0	Mo_IGKV13-84*01	100.0	L4	6	L4-6-1	12	GSGKDY	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022