PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 3R08

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Cricetulus.migratorius	Ha_IGHV5*01	100.0	Ha_IGHV5*01	100.0	H1	13	H1-13-1	23	EASGFTFSGYGMH	BBBLBAAABBBBB
H	heavy	Cricetulus.migratorius	Ha_IGHV5*01	100.0	Ha_IGHV5*01	100.0	H2	10	H2-10-2	9	YITSSSINIK	BBBAALABBB
H	heavy	Cricetulus.migratorius	Ha_IGHV5*01	100.0	Ha_IGHV5*01	100.0	H3	9	H3-9-*	-1	ARFDWDKNY	BBBBAABBB
H	heavy	Cricetulus.migratorius	Ha_IGHV5*01	100.0	Ha_IGHV5*01	100.0	H4	8	H4-8-1	11	RDNAKNLL	BBAAALBB
L	kappa	Cricetulus.migratorius	Ha_IGKV1*01	100.0	Ha_IGKV1*01	100.0	L1	11	L1-11-2	22	QASQDISNYLN	BBABBALLBBB
L	kappa	Cricetulus.migratorius	Ha_IGKV1*01	100.0	Ha_IGKV1*01	100.0	L2	8	L2-8-*	-1	YYTNKLAD	BLEABBBB
L	kappa	Cricetulus.migratorius	Ha_IGKV1*01	100.0	Ha_IGKV1*01	100.0	L3	9	L3-9-cis7-1	14	QQYYNYPWT	BBAABBbBB
L	kappa	Cricetulus.migratorius	Ha_IGKV1*01	100.0	Ha_IGKV1*01	100.0	L4	6	L4-6-1	28	GSGRDS	EBEABE

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022