PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 3R06

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	kappa	Cricetulus.migratorius	Ha_IGKV1*01	100.0	Ha_IGKV1*01	100.0	L1	11	L1-11-2	5	QASQDISNYLN	BBABBALLBBB
A	kappa	Cricetulus.migratorius	Ha_IGKV1*01	100.0	Ha_IGKV1*01	100.0	L2	8	L2-8-1	7	YYTNKLAD	BLEABBBB
A	kappa	Cricetulus.migratorius	Ha_IGKV1*01	100.0	Ha_IGKV1*01	100.0	L3	9	L3-9-cis7-1	9	QQYYNYPWT	BBAABBbBB
A	kappa	Cricetulus.migratorius	Ha_IGKV1*01	100.0	Ha_IGKV1*01	100.0	L4	6	L4-6-2	22	GSGRDS	BBEABB
B	heavy	Cricetulus.migratorius	Ha_IGHV5*01	100.0	Ha_IGHV5*01	100.0	H1	13	H1-13-1	9	EASGFTFSGYGMH	BBBLBBAAABBBB
B	heavy	Cricetulus.migratorius	Ha_IGHV5*01	100.0	Ha_IGHV5*01	100.0	H2	10	H2-10-2	9	YITSSSINIK	BBBAALABBB
B	heavy	Cricetulus.migratorius	Ha_IGHV5*01	100.0	Ha_IGHV5*01	100.0	H3	9	H3-9-*	-1	ARFDWDKNY	BBBBAABBB
B	heavy	Cricetulus.migratorius	Ha_IGHV5*01	100.0	Ha_IGHV5*01	100.0	H4	8	H4-8-1	4	RDNAKNLL	BBAAALBB
C	kappa	Cricetulus.migratorius	Ha_IGKV1*01	100.0	Ha_IGKV1*01	100.0	L1	11	L1-11-2	8	QASQDISNYLN	BBABBALLBBB
C	kappa	Cricetulus.migratorius	Ha_IGKV1*01	100.0	Ha_IGKV1*01	100.0	L2	8	L2-8-1	6	YYTNKLAD	BLLABBBB
C	kappa	Cricetulus.migratorius	Ha_IGKV1*01	100.0	Ha_IGKV1*01	100.0	L3	9	L3-9-cis7-1	8	QQYYNYPWT	BBAABBbBB
C	kappa	Cricetulus.migratorius	Ha_IGKV1*01	100.0	Ha_IGKV1*01	100.0	L4	6	L4-6-2	27	GSGRDS	BBEABB
D	heavy	Cricetulus.migratorius	Ha_IGHV5*01	100.0	Ha_IGHV5*01	100.0	H1	13	H1-13-1	9	EASGFTFSGYGMH	BBBLBBAAABBBB
D	heavy	Cricetulus.migratorius	Ha_IGHV5*01	100.0	Ha_IGHV5*01	100.0	H2	10	H2-10-2	9	YITSSSINIK	BBBAALABBB
D	heavy	Cricetulus.migratorius	Ha_IGHV5*01	100.0	Ha_IGHV5*01	100.0	H3	9	H3-9-*	-1	ARFDWDKNY	BBBBAABBB
D	heavy	Cricetulus.migratorius	Ha_IGHV5*01	100.0	Ha_IGHV5*01	100.0	H4	8	H4-8-1	4	RDNAKNLL	BBAAALBB
E	kappa	Cricetulus.migratorius	Ha_IGKV1*01	100.0	Ha_IGKV1*01	100.0	L1	11	L1-11-2	6	QASQDISNYLN	BBABBALLBBB
E	kappa	Cricetulus.migratorius	Ha_IGKV1*01	100.0	Ha_IGKV1*01	100.0	L2	8	L2-8-1	7	YYTNKLAD	BLEABBBB
E	kappa	Cricetulus.migratorius	Ha_IGKV1*01	100.0	Ha_IGKV1*01	100.0	L3	9	L3-9-cis7-1	9	QQYYNYPWT	BBAABBbBB
E	kappa	Cricetulus.migratorius	Ha_IGKV1*01	100.0	Ha_IGKV1*01	100.0	L4	6	L4-6-2	27	GSGRDS	EBEABB
F	heavy	Cricetulus.migratorius	Ha_IGHV5*01	100.0	Ha_IGHV5*01	100.0	H1	13	H1-13-1	10	EASGFTFSGYGMH	BBBLBBAAABBBB
F	heavy	Cricetulus.migratorius	Ha_IGHV5*01	100.0	Ha_IGHV5*01	100.0	H2	10	H2-10-2	9	YITSSSINIK	BBBAALABBB
F	heavy	Cricetulus.migratorius	Ha_IGHV5*01	100.0	Ha_IGHV5*01	100.0	H3	9	H3-9-*	-1	ARFDWDKNY	BBBBAABBB
F	heavy	Cricetulus.migratorius	Ha_IGHV5*01	100.0	Ha_IGHV5*01	100.0	H4	8	H4-8-1	3	RDNAKNLL	BBAAALBB
H	heavy	Cricetulus.migratorius	Ha_IGHV5*01	100.0	Ha_IGHV5*01	100.0	H1	13	H1-13-1	9	EASGFTFSGYGMH	BBBLBBAAABBBB
H	heavy	Cricetulus.migratorius	Ha_IGHV5*01	100.0	Ha_IGHV5*01	100.0	H2	10	H2-10-2	9	YITSSSINIK	BBBAALABBB
H	heavy	Cricetulus.migratorius	Ha_IGHV5*01	100.0	Ha_IGHV5*01	100.0	H3	9	H3-9-*	-1	ARFDWDKNY	BBBBAABBB
H	heavy	Cricetulus.migratorius	Ha_IGHV5*01	100.0	Ha_IGHV5*01	100.0	H4	8	H4-8-1	4	RDNAKNLL	BBAAALBB
L	kappa	Cricetulus.migratorius	Ha_IGKV1*01	100.0	Ha_IGKV1*01	100.0	L1	11	L1-11-2	8	QASQDISNYLN	BBABBALLBBB
L	kappa	Cricetulus.migratorius	Ha_IGKV1*01	100.0	Ha_IGKV1*01	100.0	L2	8	L2-8-1	6	YYTNKLAD	BLEABBBB
L	kappa	Cricetulus.migratorius	Ha_IGKV1*01	100.0	Ha_IGKV1*01	100.0	L3	9	L3-9-cis7-1	8	QQYYNYPWT	BBAABBbBB
L	kappa	Cricetulus.migratorius	Ha_IGKV1*01	100.0	Ha_IGKV1*01	100.0	L4	6	L4-6-2	24	GSGRDS	BBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022