PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 3Q3G

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	kappa	Mus.musculus	Mo_IGKV8-30*01	94.2	Mo_IGKV8-30*01	94.1	L1	17	L1-17-1	6	KSSQNLlyssnqKNYLA	BBABBABBAAALBBBBB
A	kappa	Mus.musculus	Mo_IGKV8-30*01	94.2	Mo_IGKV8-30*01	100.0	L2	8	L2-8-1	8	YWASTRES	BLLABBBB
A	kappa	Mus.musculus	Mo_IGKV8-30*01	94.2	Mo_IGKV8-30*01	100.0	L3	9	L3-9-cis7-1	7	QQYYSYPLT	BBAABBbBB
A	kappa	Mus.musculus	Mo_IGKV8-30*01	94.2	Mo_IGKV8-30*01	100.0	L4	6	L4-6-1	14	GSGTDF	EBEABB
B	heavy	Mus.musculus	Mo_IGHV14-3*02	98.6	Mo_IGHV14-3*02	76.9	H1	13	H1-13-1	22	TPSGFNIKDIYMQ	BBBLBBAAABBBB
B	heavy	Mus.musculus	Mo_IGHV14-3*02	98.6	Mo_IGHV14-3*02	80.0	H2	10	H2-10-1	12	RIDPANDKTK	BBBAAALBBB
B	heavy	Mus.musculus	Mo_IGHV14-3*02	98.6	Mo_IGHV14-3*02	50.0	H3	15	H3-15-*	-1	ASEGHYGYdGYAMDY
B	heavy	Mus.musculus	Mo_IGHV14-3*02	98.6	Mo_IGHV14-3*02	100.0	H4	8	H4-8-1	5	ADTSSNTA	BBAAALBB
C	kappa	Mus.musculus	Mo_IGKV8-30*01	94.2	Mo_IGKV8-30*01	94.1	L1	17	L1-17-1	5	KSSQNLlyssnqKNYLA	BBABBABBAAALBBBBB
C	kappa	Mus.musculus	Mo_IGKV8-30*01	94.2	Mo_IGKV8-30*01	100.0	L2	8	L2-8-1	8	YWASTRES	BLLABBBB
C	kappa	Mus.musculus	Mo_IGKV8-30*01	94.2	Mo_IGKV8-30*01	100.0	L3	9	L3-9-cis7-1	7	QQYYSYPLT	BBAABBbBB
C	kappa	Mus.musculus	Mo_IGKV8-30*01	94.2	Mo_IGKV8-30*01	100.0	L4	6	L4-6-1	14	GSGTDF	EBEABB
D	heavy	Mus.musculus	Mo_IGHV14-3*02	98.6	Mo_IGHV14-3*02	76.9	H1	13	H1-13-1	21	TPSGFNIKDIYMQ	BBBLBBAAABBBB
D	heavy	Mus.musculus	Mo_IGHV14-3*02	98.6	Mo_IGHV14-3*02	80.0	H2	10	H2-10-1	12	RIDPANDKTK	BBBAAALBBB
D	heavy	Mus.musculus	Mo_IGHV14-3*02	98.6	Mo_IGHV14-3*02	50.0	H3	15	H3-15-*	-1	ASEGHYGYdGYAMDY
D	heavy	Mus.musculus	Mo_IGHV14-3*02	98.6	Mo_IGHV14-3*02	100.0	H4	8	H4-8-1	4	ADTSSNTA	BBAAALBB
F	kappa	Mus.musculus	Mo_IGKV8-30*01	94.2	Mo_IGKV8-30*01	94.1	L1	17	L1-17-1	5	KSSQNLlyssnqKNYLA	BBABBABBAAALBBBBB
F	kappa	Mus.musculus	Mo_IGKV8-30*01	94.2	Mo_IGKV8-30*01	100.0	L2	8	L2-8-1	9	YWASTRES	BLLABBBB
F	kappa	Mus.musculus	Mo_IGKV8-30*01	94.2	Mo_IGKV8-30*01	100.0	L3	9	L3-9-cis7-1	7	QQYYSYPLT	BBAABBbBB
F	kappa	Mus.musculus	Mo_IGKV8-30*01	94.2	Mo_IGKV8-30*01	100.0	L4	6	L4-6-1	14	GSGTDF	EBEABB
H	heavy	Mus.musculus	Mo_IGHV14-3*02	98.6	Mo_IGHV14-3*02	76.9	H1	13	H1-13-1	22	TPSGFNIKDIYMQ	BBBLBBAAABBBB
H	heavy	Mus.musculus	Mo_IGHV14-3*02	98.6	Mo_IGHV14-3*02	80.0	H2	10	H2-10-1	12	RIDPANDKTK	BBBAAALBBB
H	heavy	Mus.musculus	Mo_IGHV14-3*02	98.6	Mo_IGHV14-3*02	50.0	H3	15	H3-15-*	-1	ASEGHYGYdGYAMDY
H	heavy	Mus.musculus	Mo_IGHV14-3*02	98.6	Mo_IGHV14-3*02	100.0	H4	8	H4-8-1	4	ADTSSNTA	BBAAALBB
J	kappa	Mus.musculus	Mo_IGKV8-30*01	94.2	Mo_IGKV8-30*01	94.1	L1	17	L1-17-1	5	KSSQNLlyssnqKNYLA	BBABBABBAAALBBBBB
J	kappa	Mus.musculus	Mo_IGKV8-30*01	94.2	Mo_IGKV8-30*01	100.0	L2	8	L2-8-1	9	YWASTRES	BLLABBBB
J	kappa	Mus.musculus	Mo_IGKV8-30*01	94.2	Mo_IGKV8-30*01	100.0	L3	9	L3-9-cis7-1	7	QQYYSYPLT	BBAABBbBB
J	kappa	Mus.musculus	Mo_IGKV8-30*01	94.2	Mo_IGKV8-30*01	100.0	L4	6	L4-6-1	14	GSGTDF	EBEABB
K	heavy	Mus.musculus	Mo_IGHV14-3*02	98.6	Mo_IGHV14-3*02	76.9	H1	13	H1-13-1	22	TPSGFNIKDIYMQ	BBBLBBAAABBBB
K	heavy	Mus.musculus	Mo_IGHV14-3*02	98.6	Mo_IGHV14-3*02	80.0	H2	10	H2-10-1	12	RIDPANDKTK	BBBAAALBBB
K	heavy	Mus.musculus	Mo_IGHV14-3*02	98.6	Mo_IGHV14-3*02	50.0	H3	15	H3-15-*	-1	ASEGHYGYdGYAMDY
K	heavy	Mus.musculus	Mo_IGHV14-3*02	98.6	Mo_IGHV14-3*02	100.0	H4	8	H4-8-1	4	ADTSSNTA	BBAAALBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022