PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 3PP3

#CDRs = 8; #Clusters = 9.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Mus.musculus	Hu_IGHV1-69*17	95.9	Mo_IGHV1-82*01	84.6	H1	13	H1-13-1	12	KASGYAFSYSWIN	BBBLBBAAABBBB
H	heavy	Mus.musculus	Hu_IGHV1-69*17	95.9	Mo_IGHV1-82*01	80.0	H2	10	H2-10-1	12	RIFPGDGDTD	BBBAAALBBB
H	heavy	Mus.musculus	Hu_IGHV1-69*17	95.9	Hu_IGHV1-69*17	100.0	H3	12	H3-12-*	-1	ARNVFDGYWLVY	BBBBBLLBBLAB
H	heavy	Mus.musculus	Hu_IGHV1-69*17	95.9	Hu_IGHV1-69*17	100.0	H4	8	H4-8-1	10	ADKSTSTA	BBAAALBB
I	heavy	Mus.musculus	Hu_IGHV1-69*17	95.9	Mo_IGHV1-82*01	84.6	H1	13	H1-13-1	11	KASGYAFSYSWIN	BBBLBBAAABBBB
I	heavy	Mus.musculus	Hu_IGHV1-69*17	95.9	Mo_IGHV1-82*01	80.0	H2	10	H2-10-1	10	RIFPGDGDTD	BBBAAALBBB
I	heavy	Mus.musculus	Hu_IGHV1-69*17	95.9	Hu_IGHV1-69*17	100.0	H3	12	H3-12-*	-1	ARNVFDGYWLVY	BBBBBLELBLAB
I	heavy	Mus.musculus	Hu_IGHV1-69*17	95.9	Hu_IGHV1-69*17	100.0	H4	8	H4-8-1	8	ADKSTSTA	BBAAALBB
K	kappa	Mus.musculus	Hu_IGKV2-40*01	100.0	Mo_IGKV2-109*01	100.0	L1	16	L1-16-1	9	RSSKSLlhsngITYLY	BBABBABBAALBBBBB
K	kappa	Mus.musculus	Hu_IGKV2-40*01	100.0	Mo_IGKV2-109*01	87.5	L2	8	L2-8-*	-1	YQMSNLVS	BLEABBBA
K	kappa	Mus.musculus	Hu_IGKV2-40*01	100.0	Hu_IGKV2-40*01	42.9	L3	9	L3-9-cis7-1	10	AQNLELPYT	BBAABBbBB
K	kappa	Mus.musculus	Hu_IGKV2-40*01	100.0	Hu_IGKV2-40*01	100.0	L4	6	L4-6-1	10	GSGTDF	EBEABB
L	kappa	Mus.musculus	Hu_IGKV2-40*01	100.0	Mo_IGKV2-109*01	100.0	L1	16	L1-16-1	16	RSSKSLlhsngITYLY	BBABBABBAALBBBBB
L	kappa	Mus.musculus	Hu_IGKV2-40*01	100.0	Mo_IGKV2-109*01	87.5	L2	8	L2-8-1	9	YQMSNLVS	BLEABBBB
L	kappa	Mus.musculus	Hu_IGKV2-40*01	100.0	Hu_IGKV2-40*01	42.9	L3	9	L3-9-cis7-1	10	AQNLELPYT	BBAABBbBB
L	kappa	Mus.musculus	Hu_IGKV2-40*01	100.0	Hu_IGKV2-40*01	100.0	L4	6	L4-6-1	25	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022