PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 3PHO

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	kappa	Mus.musculus	Mo_IGKV3-12*01	100.0	Mo_IGKV3-12*01	80.0	L1	15	L1-15-*	-1	RASKSVSssvnSYMH	BBABBABBAABBBBB
A	kappa	Mus.musculus	Mo_IGKV3-12*01	100.0	Mo_IGKV3-12*01	100.0	L2	8	L2-8-1	6	YLASNLES	BLLABBBB
A	kappa	Mus.musculus	Mo_IGKV3-12*01	100.0	Mo_IGKV3-12*01	85.7	L3	8	L3-8-*	-1	QHSRELRT	BBABEALB
A	kappa	Mus.musculus	Mo_IGKV3-12*01	100.0	Mo_IGKV3-12*01	100.0	L4	6	L4-6-1	6	GSGTDF	EBEABB
B	heavy	Mus.musculus	Mo_IGHV7-3*02	95.9	Mo_IGHV7-3*02	92.3	H1	13	H1-13-1	7	ATSGFTFIDYYMS	BBBLBBAAABBBB
B	heavy	Mus.musculus	Mo_IGHV7-3*02	95.9	Mo_IGHV7-3*02	91.7	H2	12	H2-12-1	7	FIRNKGngYTTE	BBBBAAALLBBB
B	heavy	Mus.musculus	Mo_IGHV7-3*02	95.9	Mo_IGHV7-3*02	100.0	H3	13	H3-13-*	-1	ARDIGYGNSPFAY	BBBBEEABBBLAB
B	heavy	Mus.musculus	Mo_IGHV7-3*02	95.9	Mo_IGHV7-3*02	87.5	H4	8	H4-8-1	10	RDNSQSIV	BBAAALBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022