PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 3OAY

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Homo.sapiens	Hu_IGHV3-21*01	74.0	Hu_IGHV3-21*01	38.5	H1	13	H1-13-1	18	GVSNFRISAHTMN	BBBLBBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV3-21*01	74.0	Hu_IGHV3-21*01	60.0	H2	10	H2-10-4	9	SISTSSTYRD	BBBBLLABBB
H	heavy	Homo.sapiens	Hu_IGHV3-21*01	74.0	Hu_IGHV3-21*01	100.0	H3	16	H3-16-*	-1	ARKGSDrlSDNDPFDA
H	heavy	Homo.sapiens	Hu_IGHV3-21*01	74.0	Hu_IGHV3-21*01	25.0	H4	8	H4-8-1	10	RDDLEDFV	BBAAALBB
K	kappa	Homo.sapiens	Hu_IGKV1-5*03	89.7	Hu_IGKV1-5*03	81.8	L1	11	L1-11-1	6	RASQSIETWLA	BBABBAEABBB
K	kappa	Homo.sapiens	Hu_IGKV1-5*03	89.7	Hu_IGKV1-5*03	62.5	L2	8	L2-8-1	6	YKASTLKT	BLLABBBB
K	kappa	Homo.sapiens	Hu_IGKV1-5*03	89.7	Hu_IGKV1-5*03	57.1	L3	9	L3-9-3	17	QHYAGYSAT	BBBBAABBB
K	kappa	Homo.sapiens	Hu_IGKV1-5*03	89.7	Hu_IGKV1-5*03	100.0	L4	6	L4-6-1	6	GSGTEF	EBEABB
L	kappa	Homo.sapiens	Hu_IGKV1-5*03	89.7	Hu_IGKV1-5*03	81.8	L1	11	L1-11-1	6	RASQSIETWLA	BBABBAEABBB
L	kappa	Homo.sapiens	Hu_IGKV1-5*03	89.7	Hu_IGKV1-5*03	62.5	L2	8	L2-8-1	6	YKASTLKT	BLLABBBB
L	kappa	Homo.sapiens	Hu_IGKV1-5*03	89.7	Hu_IGKV1-5*03	57.1	L3	9	L3-9-3	15	QHYAGYSAT	BBBBAABBB
L	kappa	Homo.sapiens	Hu_IGKV1-5*03	89.7	Hu_IGKV1-5*03	100.0	L4	6	L4-6-1	5	GSGTEF	EBEABB
M	heavy	Homo.sapiens	Hu_IGHV3-21*01	74.0	Hu_IGHV3-21*01	38.5	H1	13	H1-13-1	14	GVSNFRISAHTMN	BBBLBBAAABBBB
M	heavy	Homo.sapiens	Hu_IGHV3-21*01	74.0	Hu_IGHV3-21*01	60.0	H2	10	H2-10-4	11	SISTSSTYRD	BBBBLLABBB
M	heavy	Homo.sapiens	Hu_IGHV3-21*01	74.0	Hu_IGHV3-21*01	100.0	H3	16	H3-16-*	-1	ARKGSDrlSDNDPFDA
M	heavy	Homo.sapiens	Hu_IGHV3-21*01	74.0	Hu_IGHV3-21*01	25.0	H4	8	H4-8-1	9	RDDLEDFV	BBAAALBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022