PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 3O6M

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Mus.musculus	Mo_IGHV5-9*02	95.9	Mo_IGHV5-9*02	100.0	H1	13	H1-13-1	11	AASGFAFSSYDMS	BBBLBBAAABBBB
H	heavy	Mus.musculus	Mo_IGHV5-9*02	95.9	Mo_IGHV5-9*02	90.0	H2	10	H2-10-2	13	SISSGGSYTY	BBBAALABBB
H	heavy	Mus.musculus	Mo_IGHV5-9*02	95.9	Mo_IGHV5-9*02	100.0	H3	10	H3-10-*	-1	ARDYDYGVDY	BBBBLLEBAB
H	heavy	Mus.musculus	Mo_IGHV5-9*02	95.9	Mo_IGHV5-9*02	100.0	H4	8	H4-8-1	10	RDNARNTL	BBAAALBB
L	kappa	Mus.musculus	Mo_IGKV1-135*01	98.6	Mo_IGKV1-135*01	87.5	L1	16	L1-16-1	18	KSGQSLlysdgKTYLN	BBABBABBAALBBBBB
L	kappa	Mus.musculus	Mo_IGKV1-135*01	98.6	Mo_IGKV1-135*01	100.0	L2	8	L2-8-*	-1	YLVSKLDS	BLLABBBA
L	kappa	Mus.musculus	Mo_IGKV1-135*01	98.6	Mo_IGKV1-135*01	100.0	L3	9	L3-9-cis7-1	14	WQGTHFPRT	BBAABBbBB
L	kappa	Mus.musculus	Mo_IGKV1-135*01	98.6	Mo_IGKV1-135*01	100.0	L4	6	L4-6-1	11	GSGTDF	EEEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022