PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 3O2W

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Mus.musculus.Homo.sapiens	Mo_IGHV9-3-1*01	93.2	Mo_IGHV9-3-1*01	92.3	H1	13	H1-13-1	10	KASGYMFTNYGMN	BBBLBBAAABBBB
H	heavy	Mus.musculus.Homo.sapiens	Mo_IGHV9-3-1*01	93.2	Mo_IGHV9-3-1*01	80.0	H2	10	H2-10-1	8	WINPYTGEST	BBBAAALBBB
H	heavy	Mus.musculus.Homo.sapiens	Mo_IGHV9-3-1*01	93.2	Mo_IGHV9-3-1*01	100.0	H3	12	H3-12-1	17	ARGTTIVRAFDY	BBBBAAALBBAB
H	heavy	Mus.musculus.Homo.sapiens	Mo_IGHV9-3-1*01	93.2	Mo_IGHV9-3-1*01	87.5	H4	8	H4-8-1	13	LETSATTA	BBAAALBB
L	kappa	Mus.musculus.Homo.sapiens	Mo_IGKV1-110*01	95.6	Mo_IGKV1-110*01	100.0	L1	16	L1-16-1	10	RSSQSLvhsngNTYLH	BBABBABBAALBBBBB
L	kappa	Mus.musculus.Homo.sapiens	Mo_IGKV1-110*01	95.6	Mo_IGKV1-110*01	100.0	L2	8	L2-8-1	10	YKVSNRFS	BLEABBBB
L	kappa	Mus.musculus.Homo.sapiens	Mo_IGKV1-110*01	95.6	Mo_IGKV1-110*01	71.4	L3	9	L3-9-cis7-1	9	SQSTHFFPT	BBAABBbBB
L	kappa	Mus.musculus.Homo.sapiens	Mo_IGKV1-110*01	95.6	Mo_IGKV1-110*01	100.0	L4	6	L4-6-1	5	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022