PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 3NZ8

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Mus.musculus	Mo_IGHV1S33*01	92.4	Mo_IGHV1S33*01	92.3	H1	13	H1-13-1	10	KASGYTFTTYDIN	BBBLBBAAABBBB
A	heavy	Mus.musculus	Mo_IGHV1S33*01	92.4	Mo_IGHV1S33*01	90.0	H2	10	H2-10-1	11	WIYPGDGSNK	BBBAAALBBB
A	heavy	Mus.musculus	Mo_IGHV1S33*01	92.4	Mo_IGHV1S33*01	0.0	H3	13	H3-13-*	-1	ARGYGKNVYAMDY	BBBBEBLBABBAB
A	heavy	Mus.musculus	Mo_IGHV1S33*01	92.4	Mo_IGHV1S33*01	87.5	H4	8	H4-8-1	8	VDKSSSTA	BBAAALBB
B	kappa	Mus.musculus	Mo_IGKV1-117*02	100.0	Mo_IGKV1-117*02	81.2	L1	16	L1-16-1	15	RSSQTIvhsngYTYLD	BBABBABBAALBBBBB
B	kappa	Mus.musculus	Mo_IGKV1-117*02	100.0	Mo_IGKV1-117*02	87.5	L2	8	L2-8-1	11	YKVSNRFS	BLEABBBB
B	kappa	Mus.musculus	Mo_IGKV1-117*02	100.0	Mo_IGKV1-117*02	100.0	L3	9	L3-9-cis7-1	11	FQGSHVPFT	BBAABBbBB
B	kappa	Mus.musculus	Mo_IGKV1-117*02	100.0	Mo_IGKV1-117*02	100.0	L4	6	L4-6-1	14	GSGTDF	EBEABB
H	heavy	Mus.musculus	Mo_IGHV1S33*01	92.4	Mo_IGHV1S33*01	92.3	H1	13	H1-13-1	10	KASGYTFTTYDIN	BBBLBBAAABBBB
H	heavy	Mus.musculus	Mo_IGHV1S33*01	92.4	Mo_IGHV1S33*01	90.0	H2	10	H2-10-1	12	WIYPGDGSNK	BBBAAALBBB
H	heavy	Mus.musculus	Mo_IGHV1S33*01	92.4	Mo_IGHV1S33*01	0.0	H3	13	H3-13-*	-1	ARGYGKNVYAMDY	BBBBEBLBABBAB
H	heavy	Mus.musculus	Mo_IGHV1S33*01	92.4	Mo_IGHV1S33*01	87.5	H4	8	H4-8-1	7	VDKSSSTA	BBAAALBB
L	kappa	Mus.musculus	Mo_IGKV1-117*02	100.0	Mo_IGKV1-117*02	81.2	L1	16	L1-16-1	12	RSSQTIvhsngYTYLD	BBABBABBAALBBBBB
L	kappa	Mus.musculus	Mo_IGKV1-117*02	100.0	Mo_IGKV1-117*02	87.5	L2	8	L2-8-1	11	YKVSNRFS	BLEABBBB
L	kappa	Mus.musculus	Mo_IGKV1-117*02	100.0	Mo_IGKV1-117*02	100.0	L3	9	L3-9-cis7-1	10	FQGSHVPFT	BBAABBbBB
L	kappa	Mus.musculus	Mo_IGKV1-117*02	100.0	Mo_IGKV1-117*02	100.0	L4	6	L4-6-1	16	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022