PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 3NTC

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Homo.sapiens.Mus.musculus	Mo_IGHV1-63*02	75.3	Mo_IGHV1-63*02	84.6	H1	13	H1-13-1	8	KASGYTFTNSWIG	BBBLBBAAABBBB
H	heavy	Homo.sapiens.Mus.musculus	Mo_IGHV1-63*02	75.3	Mo_IGHV1-63*02	100.0	H2	10	H2-10-6	17	DIYPGGGYTN	BBBABLLBBB
H	heavy	Homo.sapiens.Mus.musculus	Mo_IGHV1-63*02	75.3	Mo_IGHV1-63*02	50.0	H3	11	H3-11-*	-1	SRGIPGYAMDY	BBBBBLBBBBL
H	heavy	Homo.sapiens.Mus.musculus	Mo_IGHV1-63*02	75.3	Mo_IGHV1-63*02	75.0	H4	8	H4-8-1	11	ADTSTNTA	BBAAALBB
L	kappa	Homo.sapiens.Mus.musculus	Mo_IGKV8-19*01	78.3	Mo_IGKV8-19*01	94.1	L1	17	L1-17-1	7	KSSQSLlnsgdqKNYLT	BBABBABBAAALBBBBB
L	kappa	Homo.sapiens.Mus.musculus	Mo_IGKV8-19*01	78.3	Mo_IGKV8-19*01	87.5	L2	8	L2-8-1	6	YWASTGES	BLLABBBB
L	kappa	Homo.sapiens.Mus.musculus	Mo_IGKV8-19*01	78.3	Mo_IGKV8-19*01	100.0	L3	9	L3-9-cis7-1	13	QNDYSYPWT	BBAABBbBB
L	kappa	Homo.sapiens.Mus.musculus	Mo_IGKV8-19*01	78.3	Mo_IGKV8-19*01	100.0	L4	6	L4-6-1	5	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022